{"id":"W2073290881","doi":"10.1136/jcp.2005.029777","title":"Limited tissue fixation times and whole genomic amplification do not impact array CGH profiles","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Pathology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Sir Jules Thorn Charitable Trust; Canadian Breast Cancer Research Alliance; Cancer Research Society","keywords":"Fixation (population genetics); Computational biology; Biology; Bioinformatics; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001563577,0.0005151832,0.0003673837,0.0004935316,0.0003176405,0.0006880459,0.0006247709,0.000628203,0.004395317],"category_scores_gemma":[0.003049083,0.0004655302,0.000294913,0.0004596545,0.0006629972,0.0005545121,0.0003501596,0.0007622852,0.001859991],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003569305,"about_ca_system_score_gemma":0.0004260872,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005612027,"about_ca_topic_score_gemma":0.001980247,"domain_scores_codex":[0.9986923,0.0003311521,0.0001531181,0.0003371835,0.000378282,0.0001079694],"domain_scores_gemma":[0.9967256,0.001664062,0.0005004684,0.000637401,0.0003813747,0.00009105056],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001011997,0.0000160304,0.001083702,0.00006297976,0.00001092628,0.00005112401,0.00003301957,0.0000854727,0.9955847,0.00008790066,0.00007950734,0.00280348],"study_design_scores_gemma":[0.00001950203,0.000299323,0.02221269,0.00002392594,0.0000646457,0.0007724903,0.00008859013,0.0008756876,0.9691035,0.0002860415,0.006239667,0.00001391552],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7942236,0.006415868,0.1848388,0.0008802881,0.0003421049,0.0005958739,0.002695001,0.0009013684,0.009107181],"genre_scores_gemma":[0.8334571,0.003838116,0.1434412,0.0007085275,0.000109783,0.001431968,0.006225262,0.0007017832,0.01008627],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004395317,"threshold_uncertainty_score":0.01470375,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02094483381369674,"score_gpt":0.324124102158043,"score_spread":0.3031792683443463,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}