{"id":"W2073502643","doi":"10.1016/j.celrep.2014.04.038","title":"Mutational Context and Diverse Clonal Development in Early and Late Bladder Cancer","year":2014,"lang":"en","type":"article","venue":"Cell Reports","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":153,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Centre for Applied Research in Cancer Control","funders":"","keywords":"APOBEC; Biology; Gene; Context (archaeology); Transcriptome; Genetics; Mutation; Exome sequencing; Cancer; Exome; Cancer research; Genome; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002209779,0.00007014148,0.0001767448,0.0006356463,0.0002062285,0.0003364468,0.000108395,0.00020154,0.0007436844],"category_scores_gemma":[0.0007157015,0.00009720954,0.00006165783,0.0002208812,0.0001715331,0.0001548388,0.0002248642,0.0001682172,0.00009768419],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001562567,"about_ca_system_score_gemma":0.00009633436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006180595,"about_ca_topic_score_gemma":0.001545568,"domain_scores_codex":[0.999843,0.00003549024,0.00001369743,0.00003925992,0.00003750355,0.00003100909],"domain_scores_gemma":[0.9996351,0.00009912155,0.0001267009,0.00002449295,0.00004713132,0.00006736933],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001063208,0.00007328593,0.5818515,0.00004950576,0.00004866291,0.0007259973,0.0004348115,0.0002958129,0.3935469,0.0002787597,0.0001237503,0.02150771],"study_design_scores_gemma":[0.000010182,0.0002324613,0.9775613,0.000009120238,0.00003342003,0.002305487,0.0002027297,0.0006559659,0.01826432,0.000183314,0.0005329025,0.000008785322],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995534,0.0002131774,0.00007288261,0.00000549814,6.764056e-7,0.000001782795,0.00001980838,0.000002666316,0.0001300435],"genre_scores_gemma":[0.999754,0.00006395544,0.00005765129,0.000006636144,0.000001729772,0.000001486742,0.00003437575,0.000001894637,0.00007813404],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007436844,"threshold_uncertainty_score":0.002487898,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01493620732470649,"score_gpt":0.2578736515628821,"score_spread":0.2429374442381756,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}