{"id":"W2073623948","doi":"10.1371/journal.pone.0016087","title":"Nationwide Molecular Surveillance of Pandemic H1N1 Influenza A Virus Genomes: Canada, 2009","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Biology; Virus; Pandemic; Influenza A virus; Genome; Virology; Clade; Viral evolution; Genetics; Sanger sequencing; Antigenic drift; Gene; Mutation; Phylogenetics; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Disease; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003696146,0.0003912784,0.0002281666,0.001555055,0.001991315,0.000693614,0.0008179725,0.0002989994,0.00120669],"category_scores_gemma":[0.0008082584,0.0001782975,0.0002227137,0.002219723,0.0003215668,0.0001726019,0.0004827936,0.0002992235,0.0002221411],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01939544,"about_ca_system_score_gemma":0.03006648,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9919648,"about_ca_topic_score_gemma":0.9961598,"domain_scores_codex":[0.999607,0.00001239687,0.00001391805,0.0000787497,0.0001947494,0.00009320613],"domain_scores_gemma":[0.9987264,0.0000312606,0.0001061744,0.00002164433,0.0009401283,0.0001743846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000328935,0.00006239675,0.9221011,0.0003080998,0.0001053769,0.0004045699,0.001421132,0.001352257,0.02115445,0.0004375453,0.009631306,0.04269283],"study_design_scores_gemma":[0.00001913077,0.00007068324,0.9815279,0.00005265306,0.00005169649,0.0002628003,0.001125393,0.001387292,0.002967053,0.00004419394,0.01246921,0.00002195061],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9596391,0.001636035,0.001087709,0.0004311283,0.00002824572,0.0002320627,0.03086294,0.0001405922,0.005942191],"genre_scores_gemma":[0.9768041,0.001233293,0.004645813,0.0004211505,0.0000120828,0.0000756095,0.01338688,0.00002427933,0.003396735],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01939544,"threshold_uncertainty_score":0.1407244,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1561638362064557,"score_gpt":0.3142760611797836,"score_spread":0.1581122249733279,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}