{"id":"W2073691549","doi":"10.1016/j.mex.2014.04.001","title":"Three dimensional dual labelled DNA fluorescent in situ hybridization analysis in fixed tissue sections","year":2014,"lang":"en","type":"article","venue":"MethodsX","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Children’s Health Research Institute; Western University; Lawson Health Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"In situ hybridization; In situ; Chromatin; DNA; Fluorescence; Biology; Fluorescence in situ hybridization; Fish <Actinopterygii>; Computational biology; Cell biology; Molecular biology; Biophysics; Chemistry; Biochemistry; Chromosome; Gene; Messenger RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000516527,0.00008989797,0.0001862561,0.00005671116,0.0001028102,0.00002206962,0.00007760235,0.00006288422,0.0003307706],"category_scores_gemma":[0.0001694416,0.00004055863,0.00006124397,0.001386928,0.00002280159,0.00003981952,0.00004914526,0.00008200674,0.00002158341],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000295228,"about_ca_system_score_gemma":0.000006221757,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001018327,"about_ca_topic_score_gemma":0.05418693,"domain_scores_codex":[0.998938,0.0002704916,0.000225874,0.0002514423,0.0001442774,0.0001699659],"domain_scores_gemma":[0.9994659,0.0003394603,0.00004853701,0.00005662289,0.00003798993,0.00005149444],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001544796,0.0002182151,0.06203401,0.000002409607,0.00003495526,0.000003426976,0.0001386819,0.003760543,0.8905867,0.0006200145,0.0000568778,0.04252873],"study_design_scores_gemma":[0.0002118336,0.00007224919,0.9577216,0.000005967991,0.00004536486,0.000001742327,0.00001714749,0.008583145,0.02841699,0.002863018,0.001933217,0.0001277581],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995984,0.00003018455,0.00239082,0.001090358,0.00009795291,0.0001331653,0.00001205103,0.0000239689,0.000237566],"genre_scores_gemma":[0.9882923,0.000003649874,0.01128983,0.00008049831,0.0001221846,0.000018135,0.0001127872,6.76935e-7,0.00007988253],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8956876,"threshold_uncertainty_score":0.9630717,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0224668248539115,"score_gpt":0.2659998657895129,"score_spread":0.2435330409356014,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}