{"id":"W2074020751","doi":"10.1016/j.tim.2008.11.006","title":"Type III secretion systems in symbiotic adaptation of pathogenic and non-pathogenic bacteria","year":2009,"lang":"en","type":"article","venue":"Trends in Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Virulence; Adaptation (eye); Pathogenic bacteria; Bacteria; Secretion; Microbiology; Function (biology); Evolutionary biology; Genetics; Gene; Neuroscience","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005972995,0.0002649035,0.0003647396,0.000392357,0.0002305874,0.0009340798,0.0002229642,0.0004427251,0.0003944887],"category_scores_gemma":[0.0003806193,0.0001240536,0.0003317894,0.000352767,0.0002844976,0.0005891052,0.0002937311,0.0005214044,0.0002286658],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006392636,"about_ca_system_score_gemma":0.0003718089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007623669,"about_ca_topic_score_gemma":0.0005185199,"domain_scores_codex":[0.9997883,0.00005575091,0.00002123485,0.00002828554,0.00006225571,0.00004421201],"domain_scores_gemma":[0.9997385,0.00004088536,0.00005515953,0.00002358697,0.00008171704,0.00006004459],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0003780581,0.00003319217,0.002552355,0.00008676801,0.00001232589,0.0001457439,0.0001826311,0.0001182203,0.9881023,0.001101587,0.00009694064,0.007189738],"study_design_scores_gemma":[0.00007628345,0.0009095343,0.1487435,0.0001228904,0.0001473229,0.002993019,0.002771809,0.004244859,0.8151105,0.005982472,0.01883466,0.00006316911],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.9765313,0.01750842,0.003305055,0.0004549031,0.00008689284,0.00001885071,0.00009820496,0.00004077968,0.001955602],"genre_scores_gemma":[0.9882953,0.006417453,0.002213507,0.0001187668,0.00004767402,0.00001317748,0.0003313483,0.00001497097,0.002547682],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.0009340798,"threshold_uncertainty_score":0.004638195,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01405156735332426,"score_gpt":0.2713808383513602,"score_spread":0.2573292709980359,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}