{"id":"W2074216178","doi":"10.1097/mib.0000000000000282","title":"Vitamin D Deficiency Predisposes to Adherent-invasive Escherichia coli-induced Barrier Dysfunction and Experimental Colonic Injury","year":2015,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; Toronto Rehabilitation Institute; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Pathogenesis; Biology; Microbiology; Tight junction; Barrier function; Intestinal mucosa; Microbiome; Vitamin; In vivo; Caco-2; Escherichia coli; Immunology; In vitro; Internal medicine; Medicine; Biochemistry; Cell biology; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001859353,0.0003343345,0.0003712513,0.0002170693,0.0002283048,0.00007324979,0.0001474467,0.0001080602,0.0001037184],"category_scores_gemma":[0.001481572,0.0002920497,0.0001022786,0.0002365754,0.0002507457,0.0002892437,0.0003246944,0.0001857887,0.0001642209],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003602718,"about_ca_system_score_gemma":0.0007828165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002900838,"about_ca_topic_score_gemma":0.00003062332,"domain_scores_codex":[0.9976838,0.0001332335,0.0003572582,0.0005409049,0.0007431632,0.0005415914],"domain_scores_gemma":[0.9978384,0.0001198572,0.00009024086,0.000404714,0.0003099128,0.001236896],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003829024,0.001311405,0.5711205,0.0007135447,0.0003424411,0.0007218966,0.004686189,0.00002240496,0.3762563,0.0001413994,0.03922374,0.001631127],"study_design_scores_gemma":[0.00327416,0.002701677,0.9094793,0.0002808112,0.0001967119,0.000017087,0.007238257,0.00005635971,0.0751223,0.00004941932,0.001130273,0.0004537169],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948719,0.002135257,0.000006068276,0.0002313748,0.000391854,0.001433452,0.00009237032,0.0001962136,0.0006414725],"genre_scores_gemma":[0.9980445,0.00004040452,0.0000770847,0.0003398295,0.000261719,0.0006230339,0.00002431471,0.00004791014,0.0005412278],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3383587,"threshold_uncertainty_score":0.9999532,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02094094931771659,"score_gpt":0.2928352955608435,"score_spread":0.2718943462431269,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}