{"id":"W2075123468","doi":"10.1017/s1751731114000883","title":"Imputation of ungenotyped parental genotypes in dairy and beef cattle from progeny genotypes","year":2014,"lang":"en","type":"article","venue":"animal","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Imputation (statistics); Genotype; Concordance; Biology; Single-nucleotide polymorphism; Breed; Animal science; Statistics; Genetics; Missing data; Mathematics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01293533,0.0006592627,0.00143182,0.001097886,0.0003899121,0.001280777,0.001187235,0.0007229394,0.0008063856],"category_scores_gemma":[0.02398321,0.000569264,0.001320302,0.001529577,0.0003825715,0.0005812174,0.0009178712,0.0009539343,0.0003543546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003710478,"about_ca_system_score_gemma":0.0004411049,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00357129,"about_ca_topic_score_gemma":0.004121745,"domain_scores_codex":[0.9934803,0.003975467,0.0003029066,0.001166425,0.0008243155,0.000250552],"domain_scores_gemma":[0.9847494,0.009889627,0.001314399,0.002946558,0.0009449847,0.0001549849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.002689128,0.0002509556,0.7873921,0.0001791389,0.002662529,0.00110775,0.000891989,0.07475106,0.01321779,0.00126836,0.0008430694,0.1147461],"study_design_scores_gemma":[0.0002038788,0.0005901855,0.7012649,0.0001135366,0.001190003,0.001667168,0.0004830114,0.2725813,0.01274631,0.005734878,0.003292326,0.000132539],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9383469,0.000810012,0.05907389,0.00005360384,0.00002238883,0.00002817495,0.001159769,0.0001262989,0.0003790774],"genre_scores_gemma":[0.9609106,0.0002351514,0.03398147,0.0000578702,0.00001617397,0.00003096517,0.004234254,0.00005414789,0.0004793476],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01293533,"threshold_uncertainty_score":0.06840938,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006851377737510316,"score_gpt":0.2277490036191543,"score_spread":0.220897625881644,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}