{"id":"W2075348547","doi":"10.1016/s0014-5793(03)01353-x","title":"Compact intergenic regions of the pufferfish genome facilitate isolation of gene promoters: characterization of <i>Fugu</i> 3′‐phosphoadenosine 5′‐phosphosulfate synthase 2 (<i>fPapss2</i>) gene promoter function in transgenic <i>Xenopus</i>","year":2003,"lang":"en","type":"article","venue":"FEBS Letters","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Intergenic region; Promoter; Gene; Genome; Genetics; Fugu; Reporter gene; Transposable element; Regulatory sequence; Regulation of gene expression; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003080131,0.0002497742,0.0003306445,0.0001005814,0.00005592955,0.000009626862,0.0002065829,0.0001514734,0.0000187727],"category_scores_gemma":[0.00003916426,0.0002123237,0.0002289775,0.0003809526,0.0001939907,0.00001996328,0.00003307492,0.0001375074,0.000001428204],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003485012,"about_ca_system_score_gemma":0.0000752397,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006832117,"about_ca_topic_score_gemma":0.00002687613,"domain_scores_codex":[0.9981062,0.0001829246,0.0007313808,0.0004840751,0.0002266715,0.0002687632],"domain_scores_gemma":[0.9987738,0.000006808732,0.0004797168,0.0005398049,0.0001481276,0.00005178619],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003485256,0.0002121178,0.006058675,0.0001006401,0.00009792077,5.834277e-7,0.0003376108,0.0004490289,0.992182,0.000008808875,0.00005594878,0.00014816],"study_design_scores_gemma":[0.0007302382,0.000457241,0.05395631,0.00005127105,0.00006626441,0.00001193166,0.00003172994,0.00003316339,0.9430367,0.0000148614,0.001415813,0.0001944834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983749,0.0004658855,0.01406625,0.0005246378,0.0003337227,0.0006988055,0.0001283894,0.000008214133,0.00002503637],"genre_scores_gemma":[0.9987851,0.000254602,0.0002837288,0.0002047223,0.00005755747,0.00001819675,0.0002432716,0.00003644403,0.0001163593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04914529,"threshold_uncertainty_score":0.865831,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01067246686701245,"score_gpt":0.1962263807154684,"score_spread":0.185553913848456,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}