{"id":"W2075567817","doi":"10.1097/01.pas.0000202163.82525.5c","title":"Use of Chromogenic In Situ Hybridization to Identify MYCN Gene Copy Number in Neuroblastoma Using Routine Tissue Sections","year":2006,"lang":"en","type":"article","venue":"The American Journal of Surgical Pathology","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Chromogenic in situ hybridization; CISH; Neuroblastoma; Fluorescence in situ hybridization; Copy-number variation; Biology; In situ hybridization; Gene duplication; Chromogenic; Gene dosage; Polymerase chain reaction; Molecular biology; Gene; Genetics; Cell culture; Gene expression; Chromosome; Genome; Chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003288945,0.0001202318,0.0005176833,0.0003482598,0.00003238986,0.00001034802,0.0001001927,0.00002806287,0.0000372201],"category_scores_gemma":[0.00009811803,0.0000862296,0.00009316579,0.0009529582,0.0002459401,0.00009079866,0.0000564134,0.000311242,0.00001500715],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000114212,"about_ca_system_score_gemma":0.00009236328,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000353249,"about_ca_topic_score_gemma":0.0001136374,"domain_scores_codex":[0.9982103,0.0004734625,0.0005906585,0.0001592573,0.0002753983,0.0002909768],"domain_scores_gemma":[0.9990044,0.0002180213,0.0003317923,0.0001790373,0.0001454773,0.0001212866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002582302,0.000878265,0.1849838,0.00001102538,0.00004198958,0.0177731,0.0001132121,0.005486349,0.7864536,0.00002292143,0.00007916365,0.001574213],"study_design_scores_gemma":[0.002906995,0.002587483,0.8556567,0.00009200147,0.00006961033,0.02370524,0.00005726722,0.0001388909,0.1143977,0.00006798774,0.0002110586,0.0001090574],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986649,0.0000298473,0.0003287129,0.0006616631,0.00006366166,0.0001890712,0.00000654099,0.000005733777,0.00004989746],"genre_scores_gemma":[0.9987138,0.00006724095,0.00094883,0.0001035101,0.0001009691,0.000002784903,0.000003186881,0.00001880143,0.0000408618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.672056,"threshold_uncertainty_score":0.3516341,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03135391346164058,"score_gpt":0.3534324344552184,"score_spread":0.3220785209935778,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}