{"id":"W2075855938","doi":"10.1016/j.bbagrm.2011.12.004","title":"Discovering genome regulation with 3C and 3C-related technologies","year":2011,"lang":"en","type":"review","venue":"Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Chromatin; Biology; Chromosome conformation capture; Genome; Computational biology; DNA; Interphase; Chromosome; Genetics; Replication timing; Genomics; Genomic organization; DNA replication; Transcription factor; Gene; Enhancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001084298,0.001309594,0.001905744,0.001736653,0.000296984,0.001105473,0.001653273,0.001470908,0.002315481],"category_scores_gemma":[0.0009103696,0.0005924434,0.000867866,0.0021573,0.001107485,0.001595579,0.0009351617,0.002063797,0.001589139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001335542,"about_ca_system_score_gemma":0.001089738,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001763898,"about_ca_topic_score_gemma":0.002298089,"domain_scores_codex":[0.9996859,0.00003965655,0.00002349521,0.00007802001,0.0001323975,0.00004054347],"domain_scores_gemma":[0.9996357,0.0001797358,0.00004173822,0.00002582607,0.00009574442,0.00002134467],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001204102,0.00006377861,0.0002237208,0.0105727,0.00009846548,0.0003560695,0.00008109535,0.001617642,0.03678835,0.02558841,0.01971031,0.9047791],"study_design_scores_gemma":[0.0000299582,0.00008580668,0.0006500989,0.001147371,0.0001671293,0.0008605744,0.00004207096,0.0007034923,0.02741851,0.007465476,0.9613726,0.00005693265],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0007919967,0.9843488,0.009464867,0.0004985701,0.0007053926,0.00003086633,0.0000975041,0.00009425922,0.003967684],"genre_scores_gemma":[0.003980489,0.9837217,0.008313619,0.0007172376,0.0004031254,0.00005880571,0.0002666751,0.00002028561,0.002518122],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002315481,"threshold_uncertainty_score":0.009690106,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01249443137563665,"score_gpt":0.2287936104074428,"score_spread":0.2162991790318061,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}