{"id":"W2076092893","doi":"10.1021/np500802p","title":"Proposed Systematic Nomenclature for Orbitides","year":2015,"lang":"en","type":"article","venue":"Journal of Natural Products","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome Prairie; University of Saskatchewan","funders":"Canada Foundation for Innovation; Ministry of Agriculture - Saskatchewan; Genome Canada","keywords":"Nomenclature; Biology; Taxonomy (biology); Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002419491,0.00009707922,0.0001913934,0.00003044544,0.00002506304,0.0000240221,0.000143533,0.00008921533,6.665798e-7],"category_scores_gemma":[0.001084986,0.00005969487,0.00007139259,0.00007911876,0.00002599853,0.00001205486,0.00002440813,0.0001135123,7.19092e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001828712,"about_ca_system_score_gemma":0.00009141963,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":2.288984e-7,"about_ca_topic_score_gemma":1.847454e-7,"domain_scores_codex":[0.9992968,0.00002898074,0.0002866325,0.0001215767,0.0001510499,0.0001149372],"domain_scores_gemma":[0.9987006,0.000007347585,0.000289438,0.0001130584,0.0008217742,0.00006779705],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002370433,0.00001412835,0.00002792374,0.0009888032,0.00004100802,0.000002257098,0.00003630878,0.000001207252,0.9941575,0.00004466255,0.004316933,0.0001322113],"study_design_scores_gemma":[0.0007219815,0.0006335417,0.0001725247,0.0002623948,0.00004532996,0.0003634963,0.00003400058,0.00001831075,0.9947009,0.000680476,0.002231181,0.0001358701],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939942,0.003510029,0.0001765978,0.001062036,0.0008812785,0.0003408605,0.000005229851,0.000003812141,0.00002596409],"genre_scores_gemma":[0.9941596,0.00001599029,0.00381279,0.0001452734,0.001178589,0.000002095743,0.0000422859,0.00000878108,0.0006345624],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003636192,"threshold_uncertainty_score":0.2434286,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01726721386640466,"score_gpt":0.2491888554470542,"score_spread":0.2319216415806496,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}