{"id":"W2076169855","doi":"10.1093/molbev/msj042","title":"Genome Plasticity and ori-ter Rebalancing in Salmonella typhi","year":2005,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Peking University Health Science Center; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; National Natural Science Foundation of China","keywords":"Genome; Biology; Salmonella typhi; Bacterial genome size; Genome size; Genetics; Salmonella; Genome evolution; Serotype; Gene; Bacteria; Microbiology; Escherichia coli","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001368829,0.0001852616,0.0002234328,0.0003853401,0.0001481145,0.0002196706,0.0001204439,0.0002684237,0.000381081],"category_scores_gemma":[0.0003470504,0.000139921,0.0002688991,0.0002624354,0.0002480061,0.0001860362,0.000303736,0.0002708748,0.0001634525],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001472194,"about_ca_system_score_gemma":0.0001525056,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004241467,"about_ca_topic_score_gemma":0.0004936508,"domain_scores_codex":[0.9998764,0.00002098594,0.00001181924,0.00002851251,0.00002680206,0.00003549569],"domain_scores_gemma":[0.9997578,0.00005040125,0.00009146536,0.00002919333,0.00002729887,0.00004390453],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001002218,0.00001121588,0.008509295,0.00002447741,0.000009344905,0.0001117699,0.00005497336,0.0001286866,0.989668,0.00003764151,0.00001056205,0.00133386],"study_design_scores_gemma":[0.00001935768,0.0009116032,0.5570137,0.00001685395,0.00006775626,0.002153402,0.0006628128,0.003229241,0.434159,0.0003464057,0.001385928,0.00003384856],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989452,0.0001448472,0.0005820217,0.00001401368,0.000001772827,0.000005051447,0.00008081314,0.00001357874,0.0002127586],"genre_scores_gemma":[0.9991334,0.00006604679,0.0004472826,0.00001452984,0.00000149859,0.000005584171,0.0002097794,0.000005949514,0.0001158946],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0004241467,"threshold_uncertainty_score":0.001274824,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008682523580052592,"score_gpt":0.2292082705680413,"score_spread":0.2205257469879887,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}