{"id":"W2076307849","doi":"10.1093/molbev/msl048","title":"Processed Pseudogenes Are More Abundant in Human and Mouse X Chromosomes than in Autosomes","year":2006,"lang":"en","type":"letter","venue":"Molecular Biology and Evolution","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Pseudogene; Biology; Genome; Genetics; Autosome; Chromosome; Human genome; Gene; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000916987,0.0002500174,0.0003216533,0.00006943486,0.0001451484,0.00003840292,0.0001282609,0.0007441799,0.00001886287],"category_scores_gemma":[0.0000164237,0.000121827,0.00005106313,0.0002375681,0.0001768745,0.00004768901,0.00007922507,0.0003760433,0.000002254668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004364014,"about_ca_system_score_gemma":0.00001380948,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001295545,"about_ca_topic_score_gemma":0.004347357,"domain_scores_codex":[0.9986541,0.0001370334,0.0002659454,0.0005221899,0.00008388188,0.0003368984],"domain_scores_gemma":[0.9997096,0.00004113918,0.0001240173,0.00006266416,0.00003036871,0.00003221518],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00000957071,0.0001011554,0.3902018,0.00009476997,0.0000240916,0.0001262222,0.00007902506,0.00001656769,0.6064308,0.0003532067,0.001950174,0.000612576],"study_design_scores_gemma":[0.0003253271,0.0001680942,0.9822877,0.00008797619,0.00002064655,0.00002753554,0.00006432519,0.00007438604,0.002560728,0.008609361,0.005372048,0.0004018677],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9343892,0.002196581,0.000006424535,0.06295364,0.00004399372,0.0002526288,0.00009440634,0.00003090332,0.00003218294],"genre_scores_gemma":[0.9922512,0.00007610016,0.00003274076,0.006104968,0.0002794297,0.00006289744,0.001008941,0.00000268322,0.0001810352],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6038701,"threshold_uncertainty_score":0.5739797,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008804699040788979,"score_gpt":0.2283830466701568,"score_spread":0.2195783476293678,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}