{"id":"W2076378481","doi":"10.1007/s004380051206","title":"The bacteriophage D108 Ner repressor binds a conformationally distinct operator","year":2000,"lang":"en","type":"article","venue":"Molecular and General Genetics MGG","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"Medical Research Council","keywords":"Repressor; Biology; Operator (biology); DNA; Electrophoretic mobility shift assay; Direct repeat; Podoviridae; Inverted repeat; Bacteriophage; Molecular biology; Genetics; Biophysics; Stereochemistry; Transcription factor; Chemistry; Gene; Base sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000253827,0.0003258248,0.0005466064,0.0002103629,0.0003571762,0.0005440502,0.0004502589,0.0005189274,0.001542363],"category_scores_gemma":[0.0004074001,0.0002095652,0.000333356,0.0001398359,0.0007030315,0.0002758437,0.0005401694,0.0008657146,0.0009523148],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005458731,"about_ca_system_score_gemma":0.0002566029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009620539,"about_ca_topic_score_gemma":0.001122478,"domain_scores_codex":[0.9997912,0.00002724862,0.000007543245,0.00005869738,0.00006034996,0.00005507045],"domain_scores_gemma":[0.9997315,0.00007500556,0.00002945959,0.00004610187,0.0000258467,0.00009213057],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001092691,0.00002481957,0.0003203914,0.00001770296,0.00000276851,0.00005710381,0.00002458108,0.00004935452,0.9974415,0.0006536251,0.00006755567,0.001231397],"study_design_scores_gemma":[0.00003594585,0.0001651509,0.006521158,0.00001154587,0.00000919386,0.0005221028,0.0001571959,0.001366452,0.9862112,0.000585393,0.004390081,0.000024573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896085,0.0007025728,0.006214965,0.0002382745,0.00005770682,0.00002018161,0.00009828083,0.0001873682,0.002872214],"genre_scores_gemma":[0.9923602,0.0001781648,0.003131904,0.0001970448,0.00002156416,0.00001616441,0.0003017974,0.0000419892,0.003751242],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001542363,"threshold_uncertainty_score":0.005159736,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003227953690534777,"score_gpt":0.2068651189745808,"score_spread":0.203637165284046,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}