{"id":"W2076881932","doi":"10.1128/genomea.00330-14","title":"Complete Genome Sequences of 16 Canadian Strains of Salmonella enterica subsp. <i>enterica</i> Serovar Enteritidis","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Ste. Anne's Hospital; Canadian Food Inspection Agency; Provincial Laboratory of Public Health; University of Alberta; University of Guelph; Public Health Agency of Canada","funders":"Génome Québec; Public Health Agency of Canada; Genome Canada; McGill University","keywords":"Salmonella enterica; Serotype; Pulsed-field gel electrophoresis; Biology; Foodborne pathogen; Salmonella enteritidis; Microbiology; Salmonella; Genome; Pathogen; Virology; Genetics; Bacteria; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004650981,0.0002654426,0.0005777159,0.00004708173,0.0001443906,0.00002274836,0.0006592882,0.0001117427,0.0009965118],"category_scores_gemma":[0.00002748399,0.0001364486,0.0001820255,0.0003179605,0.0002400997,0.00009450757,0.0001170768,0.0001002219,0.00006778869],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001050533,"about_ca_system_score_gemma":0.00003226558,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02933753,"about_ca_topic_score_gemma":0.01376718,"domain_scores_codex":[0.9976662,0.0002364862,0.0006994243,0.0004619286,0.0002744824,0.0006615199],"domain_scores_gemma":[0.9989365,0.00007578887,0.0003690152,0.0001799872,0.000149808,0.0002889322],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002746625,0.00008776336,0.04616259,0.0000256648,0.00005513483,0.000003904781,0.000140229,0.00000861022,0.9509175,0.00007714846,0.0001452955,0.002348664],"study_design_scores_gemma":[0.0005421392,0.001866537,0.6589438,0.00006017953,0.00005491489,0.00003093526,0.0007489093,0.00003792818,0.001759208,0.000646628,0.334703,0.0006057944],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922658,0.000314488,0.00005840488,0.0004745888,0.000185154,0.0002469647,0.002117578,0.00002439111,0.004312629],"genre_scores_gemma":[0.9972726,0.0002273528,0.000154896,0.000922744,0.000154414,0.00001601403,0.001084455,0.000003017314,0.0001645063],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9491583,"threshold_uncertainty_score":0.9999167,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02878887078444003,"score_gpt":0.219903470378165,"score_spread":0.191114599593725,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}