{"id":"W2076881932","doi":"10.1128/genomea.00330-14","title":"Complete Genome Sequences of 16 Canadian Strains of Salmonella enterica subsp. <i>enterica</i> Serovar Enteritidis","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Ste. Anne's Hospital; Canadian Food Inspection Agency; Provincial Laboratory of Public Health; University of Alberta; University of Guelph; Public Health Agency of Canada","funders":"Génome Québec; Public Health Agency of Canada; Genome Canada; McGill University","keywords":"Salmonella enterica; Serotype; Pulsed-field gel electrophoresis; Biology; Foodborne pathogen; Salmonella enteritidis; Microbiology; Salmonella; Genome; Pathogen; Virology; Genetics; Bacteria; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003716171,0.001062864,0.0005862044,0.002606658,0.001526576,0.0007872731,0.0006999079,0.0005000948,0.003842891],"category_scores_gemma":[0.001038555,0.0004580541,0.0007368318,0.004361578,0.0004033566,0.0004472321,0.0006850241,0.000926972,0.001292928],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003772877,"about_ca_system_score_gemma":0.02067769,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6145827,"about_ca_topic_score_gemma":0.7641684,"domain_scores_codex":[0.9995716,0.00001523847,0.00002861819,0.00008261535,0.0001903522,0.0001116494],"domain_scores_gemma":[0.9986022,0.00007547209,0.0001725566,0.00007360154,0.0008177731,0.0002582402],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002760439,0.0003445782,0.04436327,0.001838143,0.000213817,0.0009475636,0.002804418,0.001964797,0.8491635,0.001117844,0.01579891,0.07868293],"study_design_scores_gemma":[0.0001662981,0.0006079396,0.6952763,0.0002506609,0.0005351734,0.001081698,0.001823228,0.001814259,0.0630744,0.000527008,0.2346273,0.0002158114],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.537941,0.003816796,0.008888724,0.0005664119,0.0001801939,0.0005983273,0.4362537,0.000614552,0.01114016],"genre_scores_gemma":[0.2529762,0.003574868,0.03761476,0.0003137998,0.00004361596,0.0002788992,0.6933985,0.0002445006,0.01155488],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3854173,"threshold_uncertainty_score":0.7753743,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02878887078444003,"score_gpt":0.219903470378165,"score_spread":0.191114599593725,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}