{"id":"W2077351059","doi":"10.1111/j.1462-2920.2010.02185.x","title":"Phenotypic and metabolic profiling of colony morphology variants evolved from <i>Pseudomonas fluorescens</i> biofilms","year":2010,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Hydro (Canada); University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research","keywords":"Biofilm; Biology; Pseudomonas fluorescens; Phenotype; Metabolomics; Microbiology; Pseudomonas; Metabolome; Metabolism; Siderophore; Biochemistry; Bacteria; Genetics; Gene; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001166788,0.0002364944,0.0003304631,0.00003970025,0.00007745257,0.00000883101,0.0001623747,0.0004363013,0.0001709359],"category_scores_gemma":[0.00002377625,0.0002233603,0.00007708597,0.00003382543,0.0005829914,0.000005418444,0.0002651421,0.0002019578,0.00002487962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005532545,"about_ca_system_score_gemma":0.00002100583,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000800449,"about_ca_topic_score_gemma":0.00003223198,"domain_scores_codex":[0.9987081,0.00009255832,0.0003026164,0.0005345244,0.00003222054,0.0003299466],"domain_scores_gemma":[0.999372,0.00002251616,0.000156755,0.000357015,0.000008342956,0.00008335615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001686948,0.00008857651,0.0126326,0.000003683025,0.00008035839,0.000004482847,0.00002736861,6.053407e-7,0.9859564,0.00006090278,0.0001174379,0.00085892],"study_design_scores_gemma":[0.0008324204,0.0001803403,0.02720136,0.000003563068,0.00004309811,0.0001133266,0.00003377363,0.000004859616,0.9645067,0.0000187514,0.006838507,0.0002232882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975343,0.0009252025,0.0000220708,0.00006209581,0.0006084093,0.0002108043,0.0005541514,0.000009911792,0.00007303179],"genre_scores_gemma":[0.9884357,0.0002331965,0.009621075,0.0002671883,0.0002284114,0.000006075092,0.001117808,0.00003020229,0.00006030231],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02144966,"threshold_uncertainty_score":0.9108369,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003856643125356955,"score_gpt":0.184604667917538,"score_spread":0.180748024792181,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}