{"id":"W2077856929","doi":"10.1371/journal.ppat.1003378","title":"The SNARE Protein Syp71 Is Essential for Turnip Mosaic Virus Infection by Mediating Fusion of Virus-Induced Vesicles with Chloroplasts","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":143,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; China Scholarship Council; Oregon State University; Washington State University","keywords":"Turnip mosaic virus; Chloroplast; Biology; Cell biology; Vesicle; Viral replication; Lipid bilayer fusion; Virology; Virus; Potyvirus; Plant virus; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010721,0.0001645887,0.0001442109,0.00001990223,0.0002046402,0.00003267431,0.0001316319,0.0001316221,0.00001918764],"category_scores_gemma":[0.0001152398,0.0001116717,0.00007039133,0.00007205087,0.00004149453,0.000008795646,0.00006913462,0.00006867419,0.00000503042],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001014229,"about_ca_system_score_gemma":0.00006518178,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009810451,"about_ca_topic_score_gemma":0.00009843794,"domain_scores_codex":[0.9990381,0.00003229216,0.0002075776,0.0002858482,0.0001771214,0.0002590743],"domain_scores_gemma":[0.999277,0.00002253496,0.0001930528,0.0002468022,0.0001907388,0.00006987411],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008963944,0.00009547141,0.00005130358,0.00006822489,0.00004836436,3.624976e-7,0.0001264625,0.000001605129,0.9971352,0.000008997313,0.0001373619,0.002237007],"study_design_scores_gemma":[0.000384122,0.0006119158,0.00003075026,0.00004546673,0.0000401936,0.000004050264,0.00007968891,0.0004250365,0.996983,0.000133061,0.001106939,0.0001557675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970636,0.0001160938,0.001473781,0.00008743811,0.00006549741,0.0008836317,0.000266621,0.00001571429,0.00002766811],"genre_scores_gemma":[0.9986833,0.0001524648,0.000249835,0.00006699467,0.0001280199,0.0004744906,0.0001470536,0.00003346205,0.00006441517],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002081239,"threshold_uncertainty_score":0.4553838,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007324368798006262,"score_gpt":0.2123903225918787,"score_spread":0.2050659537938724,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}