{"id":"W2077943397","doi":"10.1128/jvi.75.23.11920-11923.2001","title":"Partial Restoration of Replication of Simian Immunodeficiency Virus by Point Mutations in either the Dimerization Initiation Site (DIS) or Gag Region after Deletion Mutagenesis within the DIS","year":2001,"lang":"en","type":"article","venue":"Journal of Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Point mutation; Viral replication; Mutation; Mutagenesis; Virology; Capsid; Virus; Simian immunodeficiency virus; clone (Java method); Genetics; Molecular biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002219222,0.0005090039,0.0002405713,0.000184814,0.0001728474,0.0002484858,0.0002499178,0.0002318194,0.0008207866],"category_scores_gemma":[0.0001805754,0.0001798442,0.0003291709,0.000161836,0.0002304487,0.0001380937,0.0002684639,0.0004613436,0.0003637803],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002554276,"about_ca_system_score_gemma":0.0002646637,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007482985,"about_ca_topic_score_gemma":0.0007336065,"domain_scores_codex":[0.9998199,0.00003924191,0.00003289424,0.00002785395,0.00004201872,0.00003802126],"domain_scores_gemma":[0.9998389,0.00003524862,0.00003130408,0.0000410665,0.00001392189,0.00003942364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005701219,0.00002777577,0.0001529216,0.00002343201,0.00000467756,0.00006904754,0.0000141601,0.0001243924,0.9986296,0.0001071034,0.0000210149,0.000768906],"study_design_scores_gemma":[0.00002537,0.0003182699,0.002640836,0.000005722797,0.00001253904,0.000453153,0.00002736653,0.001375914,0.9926463,0.00004291836,0.002444904,0.000006655555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967818,0.0002549846,0.001798681,0.00002419107,0.0000217695,0.00003178989,0.0003191259,0.00005338441,0.0007142024],"genre_scores_gemma":[0.9951131,0.0002262014,0.002512754,0.00002345866,0.000007807561,0.00002806609,0.0007872948,0.00002695206,0.001274398],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008207866,"threshold_uncertainty_score":0.002745807,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01900213338657084,"score_gpt":0.2799822144933999,"score_spread":0.260980081106829,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}