{"id":"W2078469757","doi":"10.1094/pdis-92-5-0684","title":"An Internal Reaction Control for Routine Detection of <i>Clavibacter michiganensis</i> subsp. <i>sepedonicus</i> Using a Real-Time TaqMan PCR-Based Assay","year":2008,"lang":"en","type":"article","venue":"Plant Disease","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Clavibacter michiganensis; TaqMan; Amplicon; Biology; Polymerase chain reaction; Plasmid; SYBR Green I; Molecular biology; Real-time polymerase chain reaction; Primer (cosmetics); Fastidious organism; Detection limit; Microbiology; DNA; Bacteria; Chromatography; Genetics; Chemistry; Gene; Pathogen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002417917,0.0002163276,0.0003246656,0.00002560378,0.0002524446,0.0000220022,0.0001602757,0.00008041609,0.00002240622],"category_scores_gemma":[0.00007451412,0.0001030706,0.0001812367,0.0001159755,0.00007094402,0.0001807207,0.00001925237,0.00007790541,0.000006499348],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004309789,"about_ca_system_score_gemma":0.00002861052,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004001251,"about_ca_topic_score_gemma":0.0003925989,"domain_scores_codex":[0.9986151,0.0001520885,0.0003420882,0.0003652311,0.0002043325,0.0003210973],"domain_scores_gemma":[0.9990176,0.0002986385,0.0002616975,0.00009683039,0.0001087134,0.0002165379],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00188672,0.0002223005,0.01178784,0.00001702142,0.00003534996,0.00002701264,0.00002304878,0.00001293784,0.9854966,0.000002456192,0.00009072162,0.0003979581],"study_design_scores_gemma":[0.002720818,0.0008146867,0.7563517,0.0001715798,0.0005241969,0.0001570418,0.00006147671,0.01989819,0.2158711,0.00004867575,0.00257837,0.0008021601],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941787,0.00004352614,0.0001265196,0.0001371162,0.0001565088,0.0004163535,0.004818639,0.00009824916,0.00002440227],"genre_scores_gemma":[0.9983565,0.00003585426,0.0001056462,0.0001657576,0.0002833705,0.0000336942,0.0009909472,0.000003324452,0.00002496991],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7696255,"threshold_uncertainty_score":0.4203097,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01918280941642071,"score_gpt":0.2137616572689288,"score_spread":0.1945788478525081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}