{"id":"W2078469757","doi":"10.1094/pdis-92-5-0684","title":"An Internal Reaction Control for Routine Detection of <i>Clavibacter michiganensis</i> subsp. <i>sepedonicus</i> Using a Real-Time TaqMan PCR-Based Assay","year":2008,"lang":"en","type":"article","venue":"Plant Disease","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Clavibacter michiganensis; TaqMan; Amplicon; Biology; Polymerase chain reaction; Plasmid; SYBR Green I; Molecular biology; Real-time polymerase chain reaction; Primer (cosmetics); Fastidious organism; Detection limit; Microbiology; DNA; Bacteria; Chromatography; Genetics; Chemistry; Gene; Pathogen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007676485,0.003888798,0.003102596,0.003325594,0.001215898,0.001889503,0.002802782,0.002838376,0.009813291],"category_scores_gemma":[0.006614446,0.002245694,0.002197598,0.002973937,0.002319706,0.001111695,0.001341694,0.003529323,0.005607635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001702851,"about_ca_system_score_gemma":0.003130419,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007992009,"about_ca_topic_score_gemma":0.001419553,"domain_scores_codex":[0.9787627,0.004268641,0.00166847,0.008996306,0.005014003,0.001289834],"domain_scores_gemma":[0.9949845,0.001493324,0.0008030843,0.0008565743,0.001565341,0.0002970942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003469094,0.0002865508,0.00138314,0.0005264025,0.00004208516,0.0001214577,0.0002805783,0.0002577109,0.9859264,0.001236121,0.001211709,0.008380883],"study_design_scores_gemma":[0.0001968915,0.001267226,0.006618843,0.0002297624,0.0002637452,0.0007602362,0.0001478328,0.008570706,0.942377,0.0007845378,0.03868609,0.00009703328],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1300909,0.004003652,0.8350722,0.0006173542,0.002278915,0.00562789,0.004442163,0.008168845,0.009698161],"genre_scores_gemma":[0.1312605,0.001362545,0.8242291,0.001581576,0.0003533704,0.01485848,0.01357012,0.001745171,0.01103914],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.009813291,"threshold_uncertainty_score":0.04059762,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01918280941642071,"score_gpt":0.2137616572689288,"score_spread":0.1945788478525081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}