{"id":"W2078573205","doi":"10.1073/pnas.1319929111","title":"Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns","year":2014,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":172,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of British Columbia","funders":"","keywords":"Fern; Lineage (genetic); Biology; Bryophyte; Horizontal gene transfer; Plant evolution; Adaptive evolution; Botany; Diversification (marketing strategy); Propagule; Ecosystem; Ecology; Evolutionary biology; Phylogenetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003544207,0.00007873566,0.0001622388,0.00001807285,0.0001529757,0.00001118027,0.0005617408,0.00004286371,0.00003614041],"category_scores_gemma":[0.0001052647,0.00002686299,0.00006695734,0.0004355524,0.0003112796,0.0002051721,0.00006303075,0.00006028308,0.00000144713],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005933352,"about_ca_system_score_gemma":0.000003003199,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001205289,"about_ca_topic_score_gemma":0.00001066707,"domain_scores_codex":[0.9989205,0.000006692887,0.0001833977,0.0001896012,0.0005861323,0.0001136824],"domain_scores_gemma":[0.9995977,0.0001399365,0.0001046679,0.000001273387,0.0001177026,0.00003875418],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004066295,0.00003877553,0.005346085,0.000002888442,0.00000777062,6.817211e-10,0.0001246935,0.000001582958,0.9885952,0.003635928,0.00009929178,0.002107062],"study_design_scores_gemma":[0.00004229317,0.0004184534,0.5705613,0.00003018243,0.000005575356,3.79734e-7,0.0002915422,0.000109024,0.4237254,0.004424088,0.0003316977,0.00006000554],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970227,0.00004035666,1.728826e-7,0.0008078958,0.00001205032,0.00009791419,0.0001273604,0.000007666038,0.001883857],"genre_scores_gemma":[0.9992517,0.000009973497,0.0004110982,0.0001139866,0.0001881496,0.000004632891,3.057556e-7,3.555111e-7,0.00001984022],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5652153,"threshold_uncertainty_score":0.1176581,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05547932156329946,"score_gpt":0.2446550142456728,"score_spread":0.1891756926823733,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}