{"id":"W2079023951","doi":"10.1038/sj.bjc.6601405","title":"Variation in RNA expression and genomic DNA content acquired during cell culture","year":2004,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"National Cancer Institute","keywords":"Biology; Gene; Chromosome; Comparative genomic hybridization; Genetics; RNA; DNA; Copy-number variation; Gene expression; genomic DNA; Complementary DNA; Molecular biology; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007098472,0.00005899868,0.00009610083,0.00002360208,0.0000511377,0.00003708106,0.00006316067,0.00006601478,0.0000180754],"category_scores_gemma":[0.000009250634,0.00006207213,0.00003841907,0.00002372738,0.00001654814,0.00001199675,0.00003048381,0.00005324517,3.263919e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005129932,"about_ca_system_score_gemma":0.00007398465,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001883127,"about_ca_topic_score_gemma":0.0002122393,"domain_scores_codex":[0.999505,0.00001952777,0.0002169074,0.00009117187,0.00006731704,0.0001001047],"domain_scores_gemma":[0.9996935,0.000001268001,0.0001464513,0.00004370832,0.00007264189,0.00004244072],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004930361,0.00002916378,0.001316111,0.00001746107,0.0000122543,0.00002382374,0.0002923178,0.0007038711,0.9970192,0.000006366326,0.00002722056,0.0005028686],"study_design_scores_gemma":[0.002925545,0.0001017964,0.3122905,0.0002052493,0.00001683865,0.0004436104,0.0003289618,0.000001839478,0.6821988,0.000126411,0.001232242,0.0001281994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9889951,0.01052325,0.0001368303,0.00005528581,0.0001175865,0.00005052025,0.00001481074,0.000001256995,0.0001053367],"genre_scores_gemma":[0.994234,0.004770062,0.0004477085,0.00005462035,0.000242904,0.00000427327,0.000003973524,0.00000758973,0.0002348788],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3148205,"threshold_uncertainty_score":0.2531228,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007039667260675517,"score_gpt":0.2080975013199045,"score_spread":0.201057834059229,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}