{"id":"W2079527587","doi":"10.1186/s13071-015-0834-1","title":"Identification of candidate mimicry proteins involved in parasite-driven phenotypic changes","year":2015,"lang":"en","type":"article","venue":"Parasites & Vectors","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Natural Sciences and Engineering Research Council of Canada; Université Laval","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Biology; Stickleback; Proteome; Mimicry; Phenotype; Gasterosteus; Evolutionary biology; Genetics; Gene; Computational biology; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002665783,0.0001511984,0.0002055671,0.0001164011,0.00005940381,0.00001385551,0.0002388785,0.0001064737,0.0003099609],"category_scores_gemma":[0.0001146817,0.0001429508,0.00004258703,0.0003642221,0.0001856493,0.0001953168,0.00006904686,0.0001445559,0.0007385217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001889208,"about_ca_system_score_gemma":0.00002327257,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002072338,"about_ca_topic_score_gemma":0.010308,"domain_scores_codex":[0.9988211,0.0001278777,0.000306777,0.0003089728,0.0001695288,0.0002656911],"domain_scores_gemma":[0.9993284,0.00006451095,0.000201055,0.0002754608,0.00001929035,0.0001112757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005322159,0.0001129335,0.826291,0.000004955486,0.000012565,0.000002775196,0.0009258644,0.0005469487,0.1711886,0.00003686012,0.000277899,0.0005463578],"study_design_scores_gemma":[0.0002836098,0.00009082453,0.9273023,0.00001799185,0.00001760982,0.000003261731,0.0001504831,0.0006015111,0.06935319,0.000211783,0.001797525,0.0001699228],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977462,0.0001066198,0.0001269195,0.0002067092,0.0002115585,0.0003426646,0.00001984101,0.00003649812,0.001203022],"genre_scores_gemma":[0.9990257,0.00002148574,0.0002227934,0.00007099861,0.00003641399,0.00008150962,0.00004463578,0.00001175201,0.0004847043],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1018354,"threshold_uncertainty_score":0.9492449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02356331596321962,"score_gpt":0.309334988538751,"score_spread":0.2857716725755314,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}