{"id":"W2079587196","doi":"10.1016/j.virol.2009.03.011","title":"P087, a lactococcal phage with a morphogenesis module similar to an Enterococcus faecalis prophage","year":2009,"lang":"en","type":"article","venue":"Virology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval","funders":"","keywords":"Prophage; Biology; Siphoviridae; ORFS; Lactococcus lactis; Genome; Enterococcus faecalis; Bacteriophage; Microbiology; Genetics; Plasmid; Virulence; Gene; Bacteria; Open reading frame; Escherichia coli; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001579333,0.0004708183,0.0002875071,0.00029563,0.0003233289,0.0004175776,0.0004070027,0.0005372866,0.0005653452],"category_scores_gemma":[0.0002723911,0.0001597748,0.0004442997,0.0001912738,0.0002976305,0.0001900756,0.0003613688,0.0009845523,0.0006226882],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004611517,"about_ca_system_score_gemma":0.0004741566,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001224034,"about_ca_topic_score_gemma":0.0009728756,"domain_scores_codex":[0.9998862,0.00001844467,0.000007914845,0.00001925246,0.00004065246,0.00002766739],"domain_scores_gemma":[0.9998834,0.00002531816,0.00001603358,0.00001310495,0.00001633267,0.00004567377],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00013189,0.00004199317,0.0002534967,0.00003119004,0.000007243023,0.0001808536,0.0000137138,0.00007759015,0.9959925,0.0001745183,0.0001371081,0.00295791],"study_design_scores_gemma":[0.00004159412,0.0004664015,0.002639816,0.00001162954,0.00002952324,0.001115865,0.00004511573,0.001398603,0.9863435,0.0001437361,0.007749321,0.00001480066],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882944,0.0009027135,0.007398978,0.000157807,0.0001062605,0.00009244459,0.0004442273,0.0003260297,0.002277154],"genre_scores_gemma":[0.9688845,0.0006835539,0.01807582,0.0001876749,0.00002265425,0.0001265873,0.002684472,0.0001171751,0.009217459],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001224034,"threshold_uncertainty_score":0.003345847,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006626866800812183,"score_gpt":0.2357057622879691,"score_spread":0.229078895487157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}