{"id":"W2079729315","doi":"10.1371/journal.pone.0074437","title":"Transglutaminase 2 Overexpression in Tumor Stroma Identifies Invasive Ductal Carcinomas of Breast at High Risk of Recurrence","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Blood properties and coagulation","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Breast cancer; Stroma; Stromal cell; Ductal carcinoma; Immunohistochemistry; Immunostaining; Pathology; Medicine; Hazard ratio; Oncology; Proportional hazards model; Cancer; Tissue transglutaminase; Cancer research; Metastasis; Internal medicine; Biology; Enzyme; Confidence interval","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006594568,0.00009616391,0.0003182006,0.00007765454,0.00002412057,0.000004383361,0.00006335501,0.00004630267,0.0003590785],"category_scores_gemma":[0.00007625424,0.00007745765,0.00004654101,0.0001113581,0.000077608,0.0001388638,0.00004121964,0.0001085436,0.00001405841],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003098553,"about_ca_system_score_gemma":0.00003887418,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002719595,"about_ca_topic_score_gemma":0.0001025803,"domain_scores_codex":[0.9990356,0.0000540913,0.0003146375,0.0001661419,0.0002997849,0.0001297423],"domain_scores_gemma":[0.9993501,0.00004693177,0.0001695723,0.0002202003,0.0001569974,0.00005623269],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002459447,0.0007690894,0.2794874,0.0005897725,0.00006011385,0.0000057486,0.0005826699,0.00000244179,0.7179628,0.000009304671,0.00003487427,0.0002498586],"study_design_scores_gemma":[0.0007250194,0.0002140903,0.5401399,0.001385418,0.0001013497,0.000007951749,0.0001618366,0.0001165827,0.4570272,0.0000744499,1.458789e-7,0.00004608064],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989075,0.0003159541,0.000001413362,0.0001346365,0.00001637956,0.000451463,0.00006788535,0.000009764117,0.00009497559],"genre_scores_gemma":[0.9993297,0.00006694596,0.0002917676,0.0000106951,0.00003579072,0.00002920233,0.00002685615,0.00001106623,0.0001979205],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2609356,"threshold_uncertainty_score":0.4111232,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02461060685902739,"score_gpt":0.2034966643136265,"score_spread":0.1788860574545991,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}