{"id":"W2079735634","doi":"10.1093/infdis/jit060","title":"Sequence Analysis of Transplacentally Acquired Human Herpesvirus 6 DNA Is Consistent With Transmission of a Chromosomally Integrated Reactivated Virus","year":2013,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Biology; Virology; Virus; Transmission (telecommunications); Cord blood; Gene; Sequence analysis; Sequence (biology); Herpesviridae; Human herpesvirus 6; Genetics; DNA; DNA sequencing; Viral disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003385816,0.0002490403,0.0009724112,0.000650269,0.0001292258,0.00002693081,0.0002077988,0.00009483349,0.001964283],"category_scores_gemma":[0.00005372208,0.0001367294,0.0005295784,0.001459589,0.000487685,0.0002314085,0.00001881248,0.0002764745,0.00000505505],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001714599,"about_ca_system_score_gemma":0.0005364567,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002896671,"about_ca_topic_score_gemma":0.0002399337,"domain_scores_codex":[0.9975704,0.000251422,0.0009078648,0.0001659284,0.0008271988,0.000277217],"domain_scores_gemma":[0.9971988,0.0002122471,0.0007229681,0.0003637996,0.001164552,0.000337603],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003876186,0.001548413,0.04045674,0.0002280153,0.005728287,0.00008249464,0.001404752,0.0002047496,0.9419905,0.00001387203,0.0002239671,0.004242004],"study_design_scores_gemma":[0.01013255,0.007701106,0.385909,0.002011831,0.01939444,0.0007024134,0.00122621,0.00132607,0.5700853,0.0001520044,0.0008757579,0.0004832589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976526,0.0007561425,0.0002443227,0.0002578488,0.00001937223,0.0004915912,0.0001102726,0.00002286729,0.000444931],"genre_scores_gemma":[0.9988955,0.0007309725,0.00004449299,0.0001639048,0.00002796803,0.000008223397,0.00001927253,0.00002890375,0.00008081079],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3719051,"threshold_uncertainty_score":0.998948,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02006180301443447,"score_gpt":0.2917272766787706,"score_spread":0.2716654736643362,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}