{"id":"W2079756454","doi":"10.5598/imafungus.2014.05.02.11","title":"Draft genomes of Amanita jacksonii, Ceratocystis albifundus, Fusarium circinatum, Huntiella omanensis, Leptographium procerum, Rutstroemia sydowiana, and Sclerotinia echinophila","year":2014,"lang":"en","type":"article","venue":"IMA Fungus","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"Agricultural Research Service; U.S. Department of Agriculture","keywords":"Ceratocystis; Biology; Genome; Botany; Gene; Genetics; Fungus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003951585,0.0003183871,0.0003857847,0.0001502996,0.0002601921,0.00005468876,0.0004023739,0.0001932361,0.0009110069],"category_scores_gemma":[0.00005526971,0.000316743,0.0001011853,0.0003625629,0.0005814284,0.0002207942,0.0004608024,0.00026986,0.0002576515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007510634,"about_ca_system_score_gemma":0.00001675724,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006939398,"about_ca_topic_score_gemma":0.0007467376,"domain_scores_codex":[0.9979723,0.00009608994,0.0004094836,0.0006254864,0.0003121258,0.0005844886],"domain_scores_gemma":[0.9989668,0.00008601735,0.0002198071,0.000524155,0.00002513698,0.0001780758],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001784629,0.0004776674,0.901929,0.0003833037,0.0002372987,0.0000604667,0.001351415,0.0004403637,0.03629426,0.007265988,0.02485088,0.02653094],"study_design_scores_gemma":[0.000899483,0.0005054211,0.9616985,0.00003471399,0.0001051246,0.00004403317,0.0001321412,0.000641054,0.002432416,0.001869572,0.03118278,0.0004547553],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.972388,0.0005614234,0.0001555015,0.0004130493,0.0004103806,0.0006549561,0.00002263233,0.00009794215,0.02529614],"genre_scores_gemma":[0.9972633,0.000147123,0.0008559721,0.000512287,0.00009431823,0.00003876255,0.00002175744,0.00003608503,0.001030384],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05976957,"threshold_uncertainty_score":0.9999285,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003422516854123209,"score_gpt":0.1781705473545119,"score_spread":0.1747480305003887,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}