{"id":"W2080041412","doi":"10.1038/srep00227","title":"A Gene Signature for Predicting Outcome in Patients with Basal-like Breast Cancer","year":2012,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Nonmelanoma Skin Cancer Studies","field":"Medicine","cited_by":120,"is_retracted":false,"has_abstract":true,"ca_institutions":"Juravinski Cancer Centre; McMaster University; McMaster University Medical Centre","funders":"Stem Cell Network; Ontario Institute for Cancer Research","keywords":"Breast cancer; Basal (medicine); Oncology; Medicine; Internal medicine; Disease; Cancer; Gene signature; Bioinformatics; Gene; Biology; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004612311,0.000192685,0.000289323,0.0009052753,0.0001526181,0.0003344029,0.0001675032,0.0002455462,0.001043439],"category_scores_gemma":[0.00143525,0.00005628868,0.0001588598,0.0006383671,0.0001709539,0.0001716568,0.0002140575,0.0002879781,0.0002866802],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000140007,"about_ca_system_score_gemma":0.0002296615,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006757894,"about_ca_topic_score_gemma":0.0009619109,"domain_scores_codex":[0.9998351,0.00005478236,0.0000187962,0.00002249113,0.0000334408,0.0000352984],"domain_scores_gemma":[0.9992979,0.0002444662,0.0001662196,0.00003930098,0.00009083536,0.0001612608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005279389,0.00004407817,0.9908497,0.000009623442,0.00002338185,0.00007901248,0.00002872202,0.0001299995,0.003165427,0.00001822791,0.0001142344,0.005009758],"study_design_scores_gemma":[0.00002369768,0.000418358,0.9952231,0.000007351486,0.00005373963,0.0005744197,0.0001330889,0.001499412,0.001602277,0.0001333143,0.0003252141,0.000006036904],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988606,0.0001219813,0.0002590731,0.00003947122,0.000005830367,0.00001087328,0.0002523233,0.000007333773,0.0004424998],"genre_scores_gemma":[0.9989923,0.00004677683,0.0004179418,0.00001560975,0.000007215407,0.000009701099,0.0003898426,0.000001826472,0.0001186928],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001043439,"threshold_uncertainty_score":0.003490627,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01500149594489543,"score_gpt":0.2757377831199413,"score_spread":0.2607362871750459,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}