{"id":"W2080165516","doi":"10.1128/cvi.05468-11","title":"Molecular and Cellular Characterization of a Salmonella enterica Serovar Paratyphi A Outbreak Strain and the Human Immune Response to Infection","year":2011,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Salmonella enterica; Biology; Outbreak; Microbiology; Serotype; Salmonella; Virulence; Virology; Pulsed-field gel electrophoresis; Immune system; Genotype; Immunology; Bacteria; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007370378,0.0002108463,0.0001482068,0.0002105172,0.0001389879,0.0001834063,0.00007759588,0.000216841,0.0005678494],"category_scores_gemma":[0.0001928646,0.00008146026,0.0001439323,0.0001256551,0.0001177612,0.00008557362,0.0001407594,0.0002547739,0.0001500127],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009263572,"about_ca_system_score_gemma":0.0001326973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00058824,"about_ca_topic_score_gemma":0.0005022397,"domain_scores_codex":[0.9999223,0.00001207026,0.00000650397,0.00001952512,0.00001607453,0.00002352544],"domain_scores_gemma":[0.9999049,0.00001760744,0.00002123459,0.0000136545,0.0000240328,0.00001853567],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002692941,0.00006803901,0.01354118,0.00004114647,0.00001012008,0.0005024989,0.0001192688,0.0000593014,0.9835348,0.00003133658,0.00003550913,0.001787696],"study_design_scores_gemma":[0.00003965929,0.003764297,0.6207626,0.00003394964,0.00007858009,0.006858455,0.001254143,0.001534714,0.3622077,0.0001896208,0.003258436,0.00001778462],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992489,0.0001196265,0.0002220358,0.00002052151,0.000003566176,0.00001300548,0.0001375282,0.00000241421,0.000232249],"genre_scores_gemma":[0.9980484,0.0002570545,0.0006417666,0.00004500323,0.00001115402,0.00002631542,0.000561309,0.000002621782,0.0004063103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00058824,"threshold_uncertainty_score":0.00189966,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03960139860472017,"score_gpt":0.2832251087404858,"score_spread":0.2436237101357657,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}