{"id":"W2080310211","doi":"10.1371/journal.pone.0002885","title":"Germline EPHB2 Receptor Variants in Familial Colorectal Cancer","year":2008,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research; McGill University and Génome Québec Innovation Centre; Cancer Care Ontario; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"Ontario Genomics Institute; Terry Fox Foundation; Society of University Surgeons; Genome Canada; Ontario Genomics; National Cancer Institute; National Institutes of Health; Ontario Institute for Cancer Research; Cancer Care Ontario; Burroughs Wellcome Fund","keywords":"Colorectal cancer; Germline; Genetics; Biology; Nonsynonymous substitution; Loss of heterozygosity; Germline mutation; Population; Allele; Cancer; Cancer research; Medicine; Mutation; Gene; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007785324,0.0001289221,0.0002237212,0.00007626871,0.0001283667,0.00000958507,0.0002066318,0.0000634662,0.0005303691],"category_scores_gemma":[0.0003117698,0.000127961,0.00003694984,0.0003436836,0.00009732378,0.0001596068,0.00005721434,0.0002380749,0.0002709461],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006394794,"about_ca_system_score_gemma":0.00009166508,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001124628,"about_ca_topic_score_gemma":0.00003980294,"domain_scores_codex":[0.9985311,0.00008649905,0.0002428674,0.000390515,0.0004128481,0.0003361738],"domain_scores_gemma":[0.9995466,0.0001543686,0.00006735925,0.0001206536,0.00002742223,0.00008354807],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001477252,0.0007141143,0.01148315,0.00001138587,0.000005294133,0.00009880248,0.0002146269,0.00002140659,0.986949,0.00005136786,0.0001557993,0.0001473884],"study_design_scores_gemma":[0.0006405722,0.0001345043,0.0248068,0.00008430756,0.000008377338,0.000007346574,0.000005751936,0.0006227176,0.9733345,0.00005158825,0.0001315297,0.0001719991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977659,0.00008994029,0.000004714831,0.0003662417,0.0001377805,0.0002184859,0.00003360959,0.00007044384,0.001312902],"genre_scores_gemma":[0.996812,0.0007582713,0.0001522629,0.00100746,0.0002886463,0.0000612048,0.000001738753,0.00002267188,0.0008957752],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01361444,"threshold_uncertainty_score":0.5807169,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1055408745007511,"score_gpt":0.2667174612769005,"score_spread":0.1611765867761493,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}