{"id":"W2080554049","doi":"10.1038/ismej.2014.250","title":"Culture and molecular-based profiles show shifts in bacterial communities of the upper respiratory tract that occur with age","year":2015,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":235,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; McMaster University","funders":"Canadian Institutes of Health Research; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; Canada Research Chairs; McMaster University","keywords":"Biology; Microbiome; Respiratory tract; Respiratory system; Respiratory tract infections; Metagenomics; Young adult; Immunology; Microbiology; Zoology; Ecology; Genetics; Gene; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003433583,0.0002852804,0.0003533382,0.0008757652,0.0002730063,0.0005676253,0.0001709213,0.0004641387,0.001115635],"category_scores_gemma":[0.001124832,0.0001777758,0.0003076298,0.00103991,0.0004674517,0.0004127985,0.0005113678,0.0004651569,0.0006426635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001281306,"about_ca_system_score_gemma":0.0001522724,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001556865,"about_ca_topic_score_gemma":0.00126697,"domain_scores_codex":[0.9994906,0.0000685991,0.00004168101,0.0001766769,0.0001482682,0.00007416809],"domain_scores_gemma":[0.9990526,0.0001410753,0.0005107585,0.00005065597,0.0001397001,0.0001051461],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002673461,0.00006999209,0.6497679,0.0001983356,0.0001010569,0.0005586366,0.001749839,0.0001360534,0.3203982,0.0001621196,0.000314526,0.026276],"study_design_scores_gemma":[0.000001480136,0.0002357875,0.9847553,0.00001488861,0.00002038444,0.001115123,0.0006452638,0.00006872371,0.01189674,0.00007049389,0.001165407,0.00001043902],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9892798,0.004229168,0.002687394,0.00008172441,0.00003369195,0.00003692208,0.001418275,0.00002839617,0.002204577],"genre_scores_gemma":[0.9923765,0.002158186,0.003486666,0.0001388583,0.00003061321,0.00004998145,0.0008654558,0.00001506826,0.0008786682],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001556865,"threshold_uncertainty_score":0.003732145,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03061797138519223,"score_gpt":0.2669763948138769,"score_spread":0.2363584234286847,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}