{"id":"W2081254090","doi":"10.1021/pr100745u","title":"Proteomic Analysis of Seminal Plasma from Normal Volunteers and Post-Vasectomy Patients Identifies over 2000 Proteins and Candidate Biomarkers of the Urogenital System","year":2010,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Urologic and reproductive health conditions","field":"Medicine","cited_by":170,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Epididymis; Proteome; Biology; Sperm; Vas deferens; Male infertility; Semen; Andrology; Western blot; Infertility; Genitourinary system; Vasectomy; Prostate; Proteomics; Internal medicine; Endocrinology; Bioinformatics; Medicine; Population; Genetics; Anatomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001777252,0.0001201911,0.0004778767,0.0008346764,0.0001899421,0.00002306308,0.0001672533,0.0001274005,0.00009969208],"category_scores_gemma":[0.0007811902,0.00007153299,0.0001635654,0.0007860514,0.0007380672,0.0001586911,0.0001325284,0.0008371523,0.000001066884],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008729851,"about_ca_system_score_gemma":0.0006272231,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001406688,"about_ca_topic_score_gemma":0.0001273429,"domain_scores_codex":[0.9975923,0.0002966222,0.0006373887,0.0002285842,0.0009664734,0.000278664],"domain_scores_gemma":[0.9974722,0.00012107,0.0004633028,0.0002984566,0.001442252,0.0002027629],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001360325,0.0001928482,0.4908885,0.0003840631,0.001429547,0.00002003361,0.0006918086,0.000001852799,0.5047381,0.00001161009,0.00006683345,0.000214461],"study_design_scores_gemma":[0.001549089,0.0009575429,0.9428813,0.0001933476,0.0006323548,0.00009353225,0.0004646443,0.0002774325,0.05284409,0.00001802595,0.00002617879,0.00006245496],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971974,0.0001671128,0.00001097558,0.0005125278,0.0001097871,0.001694895,0.000242584,0.000003651774,0.00006109691],"genre_scores_gemma":[0.9992495,0.00001781186,0.0004223938,0.000006857518,0.00009671138,0.00004026814,0.00001010976,0.00001110785,0.0001452162],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4519928,"threshold_uncertainty_score":0.3637057,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01354807134455108,"score_gpt":0.3068166831449821,"score_spread":0.293268611800431,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}