{"id":"W2081372128","doi":"10.1128/jcm.03552-13","title":"Head-to-Head Comparison of Second-Generation Nucleic Acid Amplification Tests for Detection of Chlamydia trachomatis and Neisseria gonorrhoeae on Urine Samples from Female Subjects and Self-Collected Vaginal Swabs","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Memorial University of Newfoundland; St. John’s Health Sciences Centre; Dalhousie University; Centre intégré universitaire de santé et de services sociaux de la Mauricie-et-du-Centre-du-Québec; Queen Elizabeth II Health Sciences Centre; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"U.S. Food and Drug Administration","keywords":"Chlamydia trachomatis; Neisseria gonorrhoeae; Nucleic Acid Amplification Tests; Chlamydiales; Chlamydiaceae; Urine; Biology; Neisseria; Chlamydia; Roche Diagnostics; Virology; Microbiology; Medicine; Internal medicine; Bacteria; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005188864,0.0008872523,0.0007062535,0.00123988,0.0003068791,0.0007511055,0.00056414,0.001038966,0.001201324],"category_scores_gemma":[0.009425349,0.0005154924,0.001121694,0.0005885215,0.0008207702,0.0006269236,0.0005682172,0.0005511138,0.000780989],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005350936,"about_ca_system_score_gemma":0.0003810508,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002326204,"about_ca_topic_score_gemma":0.004380147,"domain_scores_codex":[0.9943081,0.002505072,0.0002636062,0.001034245,0.001556021,0.0003329639],"domain_scores_gemma":[0.9895774,0.006576615,0.0009376798,0.0006352139,0.001566576,0.0007064266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.02302712,0.0005803895,0.9209206,0.0003167356,0.001803119,0.0002695921,0.0006334499,0.0005931691,0.01972057,0.00008481198,0.0004992836,0.03155106],"study_design_scores_gemma":[0.0004034617,0.01450774,0.9720368,0.00002477919,0.0004560391,0.0006880776,0.0002352354,0.001599018,0.009309636,0.00005445782,0.0006409595,0.00004375383],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974384,0.000692361,0.000705819,0.00002062413,0.00005702249,0.00005279601,0.0002217375,0.00003124712,0.0007798583],"genre_scores_gemma":[0.9980197,0.0002020605,0.0006540451,0.00009402719,0.00004167424,0.0000301681,0.0005845923,0.000009822707,0.0003639771],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005188864,"threshold_uncertainty_score":0.02744168,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08615114019169853,"score_gpt":0.4021150572007549,"score_spread":0.3159639170090563,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}