{"id":"W2081585423","doi":"10.1038/embor.2010.107","title":"Rethinking plastid evolution","year":2010,"lang":"en","type":"article","venue":"EMBO Reports","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Plastid; Evolutionary biology; Biology; Computational biology; Genetics; Gene; Chloroplast","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001690644,0.00006421394,0.0000540041,0.00001671573,0.00009807226,0.00001259125,0.00006373091,0.0001354265,0.00006168934],"category_scores_gemma":[0.0001153083,0.00006634952,0.00004626254,0.00003269638,0.00004163269,0.00000236795,0.00007807153,0.0001239006,0.00001404876],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005121271,"about_ca_system_score_gemma":0.00005211317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000025829,"about_ca_topic_score_gemma":0.00004887837,"domain_scores_codex":[0.9994662,0.00001189687,0.00010169,0.0002109468,0.00008860826,0.0001206468],"domain_scores_gemma":[0.9995584,0.000003047354,0.00007150876,0.000274435,0.00004252026,0.00005001925],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001428265,0.00002255136,0.1237123,0.000005914813,0.00001714974,0.0001055363,0.00004725827,0.000008639708,0.8684263,0.0003147463,0.007004039,0.00032125],"study_design_scores_gemma":[0.0002815845,0.0001694309,0.3644465,0.00001345303,0.00002986524,0.001510982,0.00002196813,0.00002494326,0.4945882,0.01246027,0.1260202,0.0004325635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871786,0.00005834679,0.0007090921,0.00004730971,0.0008359314,0.00007227821,0.000002946428,0.00001683517,0.01107862],"genre_scores_gemma":[0.9978804,0.000002907745,0.0007649768,0.00008367556,0.0003100507,0.0000033598,0.00005151005,0.000006299665,0.0008968071],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3738381,"threshold_uncertainty_score":0.2705655,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007193188337761958,"score_gpt":0.2133854769514231,"score_spread":0.2061922886136611,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}