{"id":"W2081730254","doi":"10.1104/pp.104.059170","title":"BioMOBY Successfully Integrates Distributed Heterogeneous Bioinformatics Web Services. The PlaNet Exemplar Case","year":2005,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":97,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Paul's Hospital","funders":"Genome Prairie; Genome Canada","keywords":"Interoperability; Web service; Computer science; World Wide Web; Semantics (computer science); Service (business); Biological database; Semantic interoperability; Ontology; Simple (philosophy); WS-I Basic Profile; Syntax; Data science; Web development; Bioinformatics; Biology; Artificial intelligence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009455633,0.000256059,0.0002291313,0.0000302039,0.0002312235,0.0000307679,0.000342567,0.0001552453,0.00002711459],"category_scores_gemma":[0.000009338331,0.000169999,0.00006944952,0.00006357175,0.0001434701,0.000001790614,0.0002286586,0.0001087092,0.00005546022],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001128523,"about_ca_system_score_gemma":0.0000380588,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001474935,"about_ca_topic_score_gemma":0.001098284,"domain_scores_codex":[0.9988917,0.00005930426,0.0003007337,0.00028479,0.0000693772,0.0003941204],"domain_scores_gemma":[0.9992911,0.00004485402,0.0001319224,0.0004106932,0.00004720885,0.00007428788],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001880251,0.00009592556,0.0009723237,0.00006312494,0.0003404767,0.00008285089,0.0002970753,0.002189042,0.9890198,0.00005794144,0.005176772,0.001516666],"study_design_scores_gemma":[0.001710934,0.0008975531,0.002616132,0.00002461246,0.0001691978,0.008821391,0.001428079,0.02294665,0.1789106,0.0001813968,0.7811603,0.001133204],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994431,0.001513142,0.00002998768,0.0002260181,0.0001869033,0.0001931532,0.00326954,0.00001231122,0.0001379949],"genre_scores_gemma":[0.994577,0.0007291692,0.0002585781,0.0007652634,0.0003600792,0.00002992947,0.003240688,0.00001712427,0.00002218623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8101092,"threshold_uncertainty_score":0.6932359,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007194926650180396,"score_gpt":0.212586126790872,"score_spread":0.2053912001406916,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}