{"id":"W2082211675","doi":"10.1016/j.ijpara.2011.03.009","title":"NEMBASE4: The nematode transcriptome resource","year":2011,"lang":"en","type":"article","venue":"International Journal for Parasitology","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Biotechnology and Biological Sciences Research Council; Broad Institute; Wellcome Trust","keywords":"Biology; Nematode; Transcriptome; Expressed sequence tag; Caenorhabditis elegans; Genomics; Evolutionary biology; Computational biology; Genome; Genetics; Gene; Ecology; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001812253,0.00008316316,0.0001072117,0.00001753362,0.0003429623,0.00004535573,0.0004849682,0.00003617934,0.0005060685],"category_scores_gemma":[0.00002466816,0.00002741758,0.0001205122,0.0000627357,0.00006800901,0.00009486949,0.00003724779,0.00009070344,0.00002946884],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001006815,"about_ca_system_score_gemma":0.00000348847,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001436784,"about_ca_topic_score_gemma":0.0000393107,"domain_scores_codex":[0.9993106,0.00004550055,0.0002153013,0.0001099888,0.0001629769,0.0001556722],"domain_scores_gemma":[0.9995757,0.00009616751,0.000126079,0.00002815575,0.0001366504,0.00003718625],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003217539,0.0008447111,0.3602044,0.00002442234,0.00239688,0.0004782992,0.00862552,0.00001563055,0.1659587,0.1370005,0.1875463,0.133687],"study_design_scores_gemma":[0.0004832297,0.0002038715,0.3982763,0.0000129436,0.00004297843,0.0006226038,0.0009840035,0.00003541998,0.001462389,0.009778134,0.5879149,0.0001832958],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9840198,0.00007452763,0.0006766661,0.008251417,0.001487467,0.0001500427,0.00001793453,0.00003401099,0.005288092],"genre_scores_gemma":[0.9966431,0.00003978695,0.00009372017,0.0014634,0.000593507,0.00002431182,0.00002326785,9.963483e-7,0.001117904],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4003686,"threshold_uncertainty_score":0.5541096,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06002453533825634,"score_gpt":0.3055417926313667,"score_spread":0.2455172572931104,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}