{"id":"W2082487934","doi":"10.1128/jcm.00168-12","title":"Evaluation of Mycobacterial Interspersed Repetitive-Unit–Variable-Number Tandem-Repeat Genotyping as Performed in Laboratories in Canada, France, and the United States","year":2012,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Genotyping; Variable number tandem repeat; Tandem repeat; Biology; Genetics; Medicine; Computational biology; Virology; Genotype; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004104199,0.0003954046,0.0004942912,0.0009214538,0.001464075,0.001863475,0.001142812,0.003732742,0.000972986],"category_scores_gemma":[0.02527007,0.0002125953,0.0002063796,0.001276844,0.002124907,0.0009178962,0.0003019269,0.002015103,0.0006218665],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005502789,"about_ca_system_score_gemma":0.002262746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04623944,"about_ca_topic_score_gemma":0.05038976,"domain_scores_codex":[0.9868868,0.006595288,0.0008871516,0.001073122,0.003533926,0.001023649],"domain_scores_gemma":[0.9817007,0.007392057,0.002195552,0.001051651,0.006506124,0.001153885],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001159811,0.0004987115,0.7883491,0.0003468633,0.0001045929,0.07939041,0.005689388,0.0008440928,0.01451229,0.003397146,0.03854753,0.06716006],"study_design_scores_gemma":[0.0001719255,0.00390381,0.6226064,0.0005791169,0.0002067113,0.234054,0.008037137,0.01220513,0.02130395,0.002813987,0.09393983,0.0001781008],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8290988,0.004148515,0.005970834,0.1101658,0.002460272,0.0002815344,0.0006088557,0.0001850718,0.04708029],"genre_scores_gemma":[0.9832643,0.0006657106,0.001638827,0.01156297,0.001009458,0.00002520409,0.0001251503,0.00002100614,0.00168744],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04623944,"threshold_uncertainty_score":0.09194058,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04510692003715524,"score_gpt":0.3660014138244596,"score_spread":0.3208944937873044,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}