{"id":"W2082887122","doi":"10.1038/nature11154","title":"Sequence analysis of mutations and translocations across breast cancer subtypes","year":2012,"lang":"en","type":"article","venue":"Nature","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1203,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Human Genome Research Institute; Instituto Nacional de Medicina Genómica; National Cancer Institute; National Institutes of Health; Instituto Carlos Slim de la Salud; Broad Institute; University of Manitoba; Howard Hughes Medical Institute","keywords":"Breast cancer; Biology; Cancer research; Fusion gene; Cancer; AKT1; Germline mutation; Genetics; GATA3; Targeted therapy; Gene; Mutation; PI3K/AKT/mTOR pathway; Transcription factor","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003872451,0.0002283222,0.0003792265,0.002096853,0.0004907947,0.0005852269,0.0002651064,0.0004248858,0.002804973],"category_scores_gemma":[0.001257723,0.0001402391,0.000420643,0.002058347,0.0002148839,0.0001851498,0.0004396621,0.0003278546,0.001097973],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004472602,"about_ca_system_score_gemma":0.0003196363,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002290678,"about_ca_topic_score_gemma":0.005105795,"domain_scores_codex":[0.9995341,0.00003480064,0.00005159104,0.0001991776,0.0001168793,0.00006337267],"domain_scores_gemma":[0.9994512,0.000143687,0.0001891764,0.00006486852,0.00008536733,0.00006562947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001543819,0.00008757203,0.2877783,0.0006900962,0.0006754173,0.00407776,0.0009078611,0.001254803,0.603938,0.000625077,0.001973337,0.09644789],"study_design_scores_gemma":[0.00006028653,0.0002454726,0.9105983,0.0001120358,0.0005077812,0.0142752,0.0006387098,0.001902089,0.0371608,0.0006831036,0.03377758,0.00003855678],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9768216,0.00282038,0.002947905,0.0001531197,0.00003575871,0.0001082768,0.01373703,0.0001165231,0.003259447],"genre_scores_gemma":[0.9627495,0.002504593,0.005833264,0.0002459616,0.00003199814,0.0001253518,0.0258833,0.0001451136,0.00248082],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002804973,"threshold_uncertainty_score":0.009383559,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008386524496313021,"score_gpt":0.3097464632896744,"score_spread":0.3013599387933614,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}