{"id":"W2083121321","doi":"10.1128/jb.00481-08","title":"A Functional Phenylacetic Acid Catabolic Pathway Is Required for Full Pathogenicity of <i>Burkholderia cenocepacia</i> in the <i>Caenorhabditis elegans</i> Host Model","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Manitoba Health Research Council; University of Minnesota","keywords":"Biology; Burkholderia cenocepacia; Mutant; Caenorhabditis elegans; Transposon mutagenesis; Virulence; Burkholderia; Microbiology; Transposable element; Gene; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008853057,0.0003901074,0.0002095492,0.0001541004,0.0001718147,0.0002274149,0.0002008747,0.0002366499,0.0007806032],"category_scores_gemma":[0.0001236788,0.0001440055,0.000202188,0.00008866126,0.0001990356,0.0001265629,0.0002312761,0.0004162177,0.0002991976],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003145111,"about_ca_system_score_gemma":0.0002873547,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002450838,"about_ca_topic_score_gemma":0.003144552,"domain_scores_codex":[0.9998336,0.00001946607,0.00001691161,0.00003320432,0.00005183843,0.00004489914],"domain_scores_gemma":[0.9998218,0.00002395582,0.00005897159,0.0000193432,0.00001861194,0.00005726225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004109771,0.00001729263,0.0001116773,0.00000901355,0.000001319279,0.00002550065,0.00000459047,0.00001556014,0.9995716,0.00001886346,0.00001036419,0.0001730712],"study_design_scores_gemma":[0.00002133851,0.0002620502,0.01381449,0.000007456931,0.00001205423,0.0003019094,0.00005335791,0.001174824,0.9831429,0.0000351825,0.001166262,0.000008118403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976342,0.0002430409,0.001017176,0.00005159679,0.00001166962,0.00002020818,0.0003350129,0.00006149117,0.0006256292],"genre_scores_gemma":[0.996452,0.0001726488,0.001592493,0.00003144398,0.000003448517,0.00002934481,0.000641698,0.00002031807,0.001056678],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002450838,"threshold_uncertainty_score":0.004873097,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0289580435743115,"score_gpt":0.2582931810917854,"score_spread":0.2293351375174739,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}