{"id":"W2083164724","doi":"10.1139/g10-029","title":"Reexamining the DNA target selectivity of Scalloped","year":2010,"lang":"en","type":"article","venue":"Genome","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Enhancer; Biology; Transcription factor; DNA; Gene; DNA-binding protein; Transcription (linguistics); Cell biology; Cofactor; Regulation of gene expression; Genetics; Biochemistry; Enzyme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002313715,0.00005735948,0.00005907846,0.00001252388,0.00006655102,0.000003357652,0.0001131676,0.00009584318,0.00003632055],"category_scores_gemma":[0.00003500023,0.00004131166,0.00002897031,0.00005304395,0.00008607504,0.000001293133,0.00006184223,0.00006593898,0.00000826252],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002284648,"about_ca_system_score_gemma":0.00003785959,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000027685,"about_ca_topic_score_gemma":0.00003354816,"domain_scores_codex":[0.9996042,0.00002883573,0.00008958894,0.0001330255,0.00004088216,0.0001034143],"domain_scores_gemma":[0.9997271,0.000007345072,0.00004573568,0.0001683629,0.00003186254,0.00001964475],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001695693,0.00001124734,0.008240485,0.000002146156,0.00001871547,1.502332e-7,0.0000363749,0.000006778463,0.9901431,0.00004941104,0.00005504134,0.001419558],"study_design_scores_gemma":[0.0001040614,0.00005536537,0.3627194,6.698594e-7,0.00000338112,0.00000860943,0.00001269358,0.000004906236,0.6061725,0.000141754,0.03071392,0.00006269092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996617,0.00009276311,0.0003166175,0.0001042498,0.0001412448,0.00007393802,0.000005030844,0.000004389729,0.002644774],"genre_scores_gemma":[0.9977754,0.000009226214,0.001208966,0.00008249641,0.0001093719,0.000005875037,0.00007158044,0.000005063599,0.000731999],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3839706,"threshold_uncertainty_score":0.1684641,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005127181103284699,"score_gpt":0.2143065763524247,"score_spread":0.20917939524914,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}