{"id":"W2084120324","doi":"10.1371/journal.pbio.0050244","title":"Salmonella enterica Serovar Typhimurium Exploits Inflammation to Compete with the Intestinal Microbiota","year":2007,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1056,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Wellcome Trust; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Biology; Salmonella enterica; Microbiology; Colonisation resistance; Pathogen; Immune system; Salmonella; Colonization; Pathogenicity island; Microbiome; Inflammation; Colitis; Immunology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000158146,0.000437847,0.0001991675,0.0001504291,0.00008577656,0.0003188769,0.000117546,0.0002827545,0.0002816122],"category_scores_gemma":[0.00006768416,0.0001290309,0.0001776572,0.00007939118,0.0003355063,0.000161513,0.0003007221,0.0003250882,0.0001584429],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000172778,"about_ca_system_score_gemma":0.0001835345,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003214693,"about_ca_topic_score_gemma":0.0005426089,"domain_scores_codex":[0.999886,0.0000319191,0.000006168263,0.00002109971,0.00001997355,0.00003476781],"domain_scores_gemma":[0.9999224,0.000008576831,0.00002896124,0.00001017268,0.000004972753,0.00002482804],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005862267,0.00001112151,0.0004535832,0.00001381208,0.000002038423,0.00004100495,0.000006110941,0.0000294642,0.9987558,0.00008414874,0.000009122051,0.0005351311],"study_design_scores_gemma":[0.00003599729,0.001821678,0.01758165,0.00001152871,0.00003194678,0.001512027,0.00009550116,0.001335329,0.9747006,0.0003072079,0.00255589,0.00001052924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957059,0.001367516,0.001906001,0.0001281067,0.00001404361,0.000006172736,0.00002477718,0.00004601329,0.0008015694],"genre_scores_gemma":[0.9972739,0.0007291432,0.001456926,0.00005239284,0.000006213481,0.000004619591,0.0000362173,0.000006138639,0.0004344829],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000437847,"threshold_uncertainty_score":0.001253605,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01150483330565448,"score_gpt":0.2493823760684696,"score_spread":0.2378775427628151,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}