{"id":"W2084477034","doi":"10.1186/1471-2164-11-313","title":"The collapse of gene complement following whole genome duplication","year":2010,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":131,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Computer Research Institute of Montréal; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene duplication; Genome; Genetics; Gene; Transposable element; Genome evolution; Chromosome; Segmental duplication; Gene dosage; Gene family; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001706633,0.00005843335,0.00007115932,0.000003184844,0.0002979678,0.00003410107,0.0002211327,0.0000341208,0.00006615182],"category_scores_gemma":[0.00002074934,0.00002110154,0.00007646607,0.0001042582,0.00002770853,0.00001632218,0.00004939893,0.00004672402,0.00003156603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001250025,"about_ca_system_score_gemma":0.00001706606,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006407714,"about_ca_topic_score_gemma":0.004336596,"domain_scores_codex":[0.9994676,0.00001735734,0.0001780792,0.00011994,0.00008868802,0.0001283841],"domain_scores_gemma":[0.999643,0.0001118428,0.00008017255,0.00008424358,0.00003964892,0.00004112916],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000003228505,0.0000219525,0.003827339,7.576713e-7,0.000006291914,6.660976e-8,0.00006044591,0.0000333491,0.9923745,0.0006769024,0.00002542952,0.002969716],"study_design_scores_gemma":[0.0002184503,0.00009829328,0.570357,0.000001670616,0.00002527479,0.000003519104,0.0003886652,0.0004999983,0.0425372,0.002197219,0.3835106,0.000162157],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982998,0.00007570205,0.00005171424,0.0007821075,0.0001807537,0.0002012222,0.00007768512,0.00001189566,0.0003190837],"genre_scores_gemma":[0.9976677,0.00001128877,0.001791714,0.00003746061,0.0001838064,0.00001740344,0.00009164797,6.457861e-7,0.0001982876],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9498373,"threshold_uncertainty_score":0.2419922,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0241065475661484,"score_gpt":0.2304434411210685,"score_spread":0.2063368935549201,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}