{"id":"W2084575312","doi":"10.1021/bi047957p","title":"Interactions of the HIV-1 Tat and RAP74 Proteins with the RNA Polymerase II CTD Phosphatase FCP1","year":2005,"lang":"en","type":"article","venue":"Biochemistry","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Biology; Phosphorylation; Protein subunit; RNA polymerase II; Phosphatase; Protein phosphatase 1; Biochemistry; Cell biology; RNA polymerase; Binding site; Molecular biology; RNA; Promoter; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001176889,0.0002821688,0.0002345782,0.0001731448,0.0002587509,0.0003995605,0.0002398848,0.0002965511,0.001270401],"category_scores_gemma":[0.0001924679,0.0002048963,0.0002891397,0.0001450134,0.000169998,0.0002205723,0.0002938767,0.0003405021,0.0005842894],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007943249,"about_ca_system_score_gemma":0.0002141102,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00175266,"about_ca_topic_score_gemma":0.001980401,"domain_scores_codex":[0.9997771,0.00003393741,0.00000738919,0.00003644246,0.00007710794,0.00006802805],"domain_scores_gemma":[0.9999555,0.000008526826,0.00001016452,0.000004573916,0.000007572064,0.0000135953],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001877467,0.0000246253,0.0007629799,0.00004342963,0.0000144255,0.0001471689,0.00002298303,0.0002370724,0.995246,0.0002680374,0.0001726749,0.002872914],"study_design_scores_gemma":[0.00002437323,0.0001157201,0.02485617,0.000009039753,0.00002113782,0.0009229922,0.00005710429,0.005322467,0.9620627,0.0001433951,0.006447175,0.00001781921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992667,0.00402803,0.001116709,0.0001389588,0.00002083499,0.00001152163,0.0002084464,0.00003092679,0.0017776],"genre_scores_gemma":[0.9921909,0.001496635,0.00181315,0.0001140074,0.0000121069,0.00001953363,0.0008312836,0.00001261766,0.003509742],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00175266,"threshold_uncertainty_score":0.005763233,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005140229820160498,"score_gpt":0.2353263262592803,"score_spread":0.2301860964391198,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}