{"id":"W2084708009","doi":"10.1038/ng.215","title":"Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease","year":2008,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":661,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Montreal Heart Institute; Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute","keywords":"Biology; Genetics; Linkage disequilibrium; Single-nucleotide polymorphism; ATG16L1; Genome-wide association study; Autophagy; Disease; Genetic association; Population; Haplotype; Allele; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002772115,0.001062208,0.0007490091,0.001302074,0.0006482037,0.0005035959,0.0006719496,0.001711389,0.004978704],"category_scores_gemma":[0.001213939,0.0003576869,0.0008492339,0.0009115066,0.0009093752,0.0002255998,0.0004529048,0.001333291,0.001142736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002976132,"about_ca_system_score_gemma":0.0002599504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001001122,"about_ca_topic_score_gemma":0.0007597263,"domain_scores_codex":[0.9993218,0.000163758,0.0001039204,0.0001852856,0.0001019416,0.0001232632],"domain_scores_gemma":[0.9981275,0.000797182,0.0005788241,0.0001194099,0.00009281786,0.0002841774],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.005392337,0.0005486353,0.02987572,0.0001817201,0.0002344904,0.03138918,0.0005281231,0.0004829692,0.9239823,0.0008122924,0.0005310149,0.006041168],"study_design_scores_gemma":[0.001161587,0.002841546,0.5966024,0.0003264772,0.001292455,0.1323214,0.0008932378,0.004657013,0.2483644,0.001328177,0.01000155,0.0002097354],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965937,0.0002573774,0.001278544,0.0001969726,0.00007399424,0.00003069485,0.0004833224,0.00005266178,0.001032732],"genre_scores_gemma":[0.9978057,0.0000538629,0.001004142,0.0001098041,0.00006310611,0.00001468365,0.0003985499,0.00004128382,0.0005089095],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004978704,"threshold_uncertainty_score":0.01665545,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0137175570418332,"score_gpt":0.264120258224963,"score_spread":0.2504027011831298,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}