{"id":"W2085343919","doi":"10.3168/jds.2010-3987","title":"Technical note: Comparative analyses of the quality and yield of genomic DNA from invasive and noninvasive, automated and manual extraction methods","year":2011,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Teagasc; DNA Genotek","keywords":"DNA extraction; Semen; Buffy coat; Extraction (chemistry); DNA; Biology; Chromatography; genomic DNA; Chemistry; Polymerase chain reaction; Genetics; Immunology; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006097493,0.00006409704,0.0001692723,0.00004517417,0.00006737703,0.000006660597,0.000182641,0.00007509287,0.000002712197],"category_scores_gemma":[0.0001840315,0.00004257365,0.00003936197,0.00009918131,0.0009137134,0.00001111911,0.0001504704,0.00008738781,3.146137e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005589417,"about_ca_system_score_gemma":0.0001010742,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007344956,"about_ca_topic_score_gemma":0.00002628799,"domain_scores_codex":[0.9993024,0.0001028075,0.000293797,0.0001487427,0.00008584974,0.00006639065],"domain_scores_gemma":[0.9991224,0.00007663046,0.0004564292,0.0001575094,0.0001410083,0.00004602428],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003163607,0.0000269506,0.00383893,0.000004402656,0.00001293146,3.975094e-7,0.0001125667,0.000001212249,0.9952326,0.00006916396,0.00002985172,0.0006393658],"study_design_scores_gemma":[0.00008498518,0.0001541259,0.2545493,0.0000137452,0.0000266095,0.00005033015,0.0001011854,0.00004860035,0.7446281,0.0002842858,0.00002285561,0.00003583551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9794266,0.0004570385,0.01982361,0.00005270497,0.00001948916,0.00007832779,0.00001470182,0.000002642592,0.0001249201],"genre_scores_gemma":[0.9217046,0.0001886488,0.07804848,0.00004167168,0.000009658065,0.000001386623,9.292528e-7,0.000001743168,0.000002872422],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2507104,"threshold_uncertainty_score":0.3366615,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1129935727815619,"score_gpt":0.4498785416872796,"score_spread":0.3368849689057176,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}