{"id":"W2086430222","doi":"10.1007/s00122-010-1367-9","title":"Phylogenetic inferences in Avena based on analysis of FL intron2 sequences","year":2010,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture; Agriculture and Agri-Food Canada","funders":"Sichuan Agricultural University; Sichuan University","keywords":"Biology; Avena; Plant biochemistry; Phylogenetic tree; Phylogenetics; Phylogenetic relationship; Evolutionary biology; Botany; Genetics; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002558886,0.0001503095,0.0002654899,0.0001324853,0.00002399488,0.000007972017,0.0001764493,0.0001823221,0.0000649364],"category_scores_gemma":[0.00007323221,0.0001185939,0.00005112236,0.0002300541,0.001007925,5.157085e-7,0.00007098219,0.0001419513,0.000002158794],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002632933,"about_ca_system_score_gemma":0.00003885736,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003565423,"about_ca_topic_score_gemma":0.00005629449,"domain_scores_codex":[0.9989961,0.0000530974,0.0002191042,0.0004215268,0.0001036502,0.0002065475],"domain_scores_gemma":[0.999447,0.00006453881,0.00006188649,0.0003253024,0.0000335674,0.00006766801],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001650315,0.00008403777,0.02597614,0.000008365413,0.0000768538,7.194956e-7,0.00002072614,0.001195472,0.9098942,0.05844995,0.000005120278,0.00412336],"study_design_scores_gemma":[0.0005275097,0.0006082201,0.1325801,0.000006166284,0.0002146048,0.000002864287,0.0000430884,0.005401197,0.8436928,0.01612344,0.0004681473,0.0003318506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964761,0.00009437973,0.0004342283,0.0001057192,0.00004419962,0.0001249477,0.00003708099,0.000004593183,0.002678722],"genre_scores_gemma":[0.9981441,0.00008043082,0.001449572,0.0001403758,0.00007639116,0.00001542827,0.00007921927,0.000007430421,0.000007038452],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1066039,"threshold_uncertainty_score":0.4836119,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004463647433322555,"score_gpt":0.2291600621109427,"score_spread":0.2246964146776201,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}