{"id":"W2086780915","doi":"10.1128/jb.01169-12","title":"Gene Cluster Encoding Cholate Catabolism in Rhodococcus spp","year":2012,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Steroid Chemistry and Biochemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Rhodococcus; Biology; Catabolism; Gene cluster; Biochemistry; Gene; Metabolism; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004458865,0.0001573761,0.0002630162,0.00005123144,0.00002830948,0.00001238772,0.0002452059,0.0002836902,0.000059961],"category_scores_gemma":[0.0001240928,0.0001354573,0.0001193508,0.00005937994,0.00005572937,0.00001418483,0.0001125168,0.0002594531,0.000009545533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000278192,"about_ca_system_score_gemma":0.00004966387,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002873744,"about_ca_topic_score_gemma":0.000001330265,"domain_scores_codex":[0.9988838,0.00007211414,0.0004591014,0.0001489485,0.00007564088,0.0003604352],"domain_scores_gemma":[0.9992581,0.00001844599,0.0002991033,0.0002070306,0.00007215355,0.0001451748],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001905808,0.00006618616,0.0298517,0.00001515701,0.0000338631,0.00001128768,0.00005772728,0.000008382368,0.9686636,0.000001112424,0.000577404,0.0005229668],"study_design_scores_gemma":[0.0009155754,0.0001020616,0.04427189,0.00002183663,0.00001586499,0.001191081,0.00004548829,0.000001975261,0.9357323,0.00001067625,0.01752771,0.0001635239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968811,0.001663367,0.00007852337,0.0001273413,0.0005727102,0.00004086067,0.000007377992,0.000002460019,0.0006262576],"genre_scores_gemma":[0.9967125,0.0003180616,0.0005283656,0.0003310483,0.001832647,0.00000263785,0.00002903781,0.00001413681,0.0002315878],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03293131,"threshold_uncertainty_score":0.5523787,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01210979871940901,"score_gpt":0.2577878030338012,"score_spread":0.2456780043143922,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}