{"id":"W2086895292","doi":"10.3109/00365521.2013.857713","title":"Effect of inflammatory bowel disease therapies on immunogenicity of<i>Mycobacterium paratuberculosis</i>proteins","year":2013,"lang":"en","type":"article","venue":"Scandinavian Journal of Gastroenterology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Earl Haig Secondary School; University of Toronto; Mount Sinai Hospital; University of British Columbia","funders":"","keywords":"Immunogenicity; Antibody; Ulcerative colitis; Inflammatory bowel disease; Medicine; Immunology; Mycobacterium avium subspecies paratuberculosis; Paratuberculosis; Crohn's disease; Disease; Internal medicine; Pathology; Mycobacterium; Tuberculosis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006583147,0.0002501519,0.0008489879,0.0003684514,0.00004075072,0.00001617585,0.00026439,0.00009277748,0.0005258757],"category_scores_gemma":[0.0002878859,0.0001733721,0.000507837,0.00009965808,0.0003309915,0.0001822076,0.00006267709,0.0004210912,0.00002157928],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007477401,"about_ca_system_score_gemma":0.00009224404,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003551424,"about_ca_topic_score_gemma":0.00000306453,"domain_scores_codex":[0.9974811,0.0005862711,0.0008144325,0.0001821755,0.0004602501,0.0004757729],"domain_scores_gemma":[0.9978291,0.0002011205,0.0006509587,0.0003938161,0.0003889824,0.0005360264],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02533556,0.0003247956,0.8954818,0.0005611946,0.0004558471,0.0001105422,0.00009780299,0.000003683982,0.07615048,0.000007541451,0.0007908421,0.0006799415],"study_design_scores_gemma":[0.004628582,0.02890976,0.9346359,0.0006955939,0.0002312142,0.0002123375,0.00003158255,0.000008099915,0.03047322,0.0000454025,0.00005792305,0.00007034251],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974518,0.0005898147,0.00003091527,0.001011158,0.0002483199,0.0005594526,0.00003714065,0.000008005552,0.00006336316],"genre_scores_gemma":[0.9989226,0.0004849879,0.0001040116,0.0002121901,0.0001816223,0.00003636211,0.000009219393,0.00002427654,0.00002466672],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04567725,"threshold_uncertainty_score":0.7069909,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006106051636949272,"score_gpt":0.253306487629247,"score_spread":0.2472004359922977,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}