{"id":"W2087345056","doi":"10.1186/1471-2148-7-s1-s14","title":"Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human","year":2007,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto; Ontario Genomics Institute; Ontario Genomics","keywords":"Biology; Genome; Computational biology; Non-coding RNA; Genetics; Human genome; Gene; RNA; Conserved sequence; Evolutionary biology; Base sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009067879,0.0001698477,0.0003985614,0.0003100206,0.00009198747,0.000004442413,0.0004073949,0.0002369399,0.0001428838],"category_scores_gemma":[0.00004243922,0.0001654898,0.0001188888,0.0003836907,0.000163369,0.000008200832,0.0001860709,0.00008870407,0.00000855324],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004096513,"about_ca_system_score_gemma":0.00006562152,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002771224,"about_ca_topic_score_gemma":0.0001370262,"domain_scores_codex":[0.9983405,0.0001241469,0.0005350712,0.0005899707,0.0001099823,0.0003002563],"domain_scores_gemma":[0.9988638,0.00008043053,0.0002234252,0.0006758582,0.0001002709,0.00005626718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001979763,0.0001432504,0.02632149,0.000008978294,0.0002394057,7.500902e-7,0.00002269344,0.0005810264,0.9683161,0.004019796,0.00009223209,0.00005624366],"study_design_scores_gemma":[0.0007613539,0.0002917422,0.7258011,0.00001597061,0.0001536905,0.00001421346,0.0002098244,0.0003592525,0.254621,0.0008984645,0.01646258,0.0004107901],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6459852,0.002282119,0.3500302,0.00001696221,0.0001125876,0.0002049324,0.0003125491,0.000009153882,0.001046353],"genre_scores_gemma":[0.9807935,0.00005905579,0.01449772,0.00003925984,0.0001857139,0.00001324178,0.00422218,0.000009318765,0.0001799649],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7136952,"threshold_uncertainty_score":0.6748479,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08457440330529757,"score_gpt":0.3274038713235542,"score_spread":0.2428294680182566,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}