{"id":"W2087362850","doi":"10.1007/s007050170106","title":"Diverged evolution of recent equine-2 influenza (H3N8) viruses in the Western Hemisphere","year":2001,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":154,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"Grayson-Jockey Club Research Foundation","keywords":"Biology; Lineage (genetic); Nonsynonymous substitution; Phylogenetic tree; Virus; Viral evolution; Virology; Phylogenetics; Influenza A virus; Antigenic drift; Molecular evolution; H5N1 genetic structure; Genetics; Evolutionary biology; Gene; Coronavirus disease 2019 (COVID-19); Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002872882,0.0001373918,0.0004052417,0.0001861869,0.00005042744,0.000002450165,0.0002777188,0.00006734961,0.000106373],"category_scores_gemma":[0.0005425708,0.00009441678,0.00008897654,0.0002575208,0.0006934038,0.00004782077,0.0002019568,0.0002840591,0.00001678171],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003138542,"about_ca_system_score_gemma":0.00008668385,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005918366,"about_ca_topic_score_gemma":0.0004394565,"domain_scores_codex":[0.9984394,0.0002649711,0.000445516,0.0002063635,0.0002851476,0.0003585758],"domain_scores_gemma":[0.9987457,0.0006075835,0.0001449135,0.0003976645,0.00005576865,0.00004833896],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003355401,0.0004328154,0.8053267,0.0001261566,0.0001381608,0.0000441493,0.003914271,0.0001050097,0.1776454,0.0005492631,0.0002615307,0.008101216],"study_design_scores_gemma":[0.002989773,0.001486219,0.9496781,0.00009070828,0.00005331909,0.00004260148,0.0007238637,0.00008480781,0.005662187,0.001427807,0.03765496,0.0001056803],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9852754,0.00263227,0.0001012175,0.0009619847,0.00003548126,0.0003672418,0.00001187876,0.00001434283,0.01060022],"genre_scores_gemma":[0.9966362,0.001518878,0.0002351438,0.001431965,0.00005353659,0.00003310808,0.000003144089,0.00001159159,0.00007647785],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1719832,"threshold_uncertainty_score":0.3850205,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1041532959852447,"score_gpt":0.3913139738627336,"score_spread":0.2871606778774889,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}