{"id":"W2087543298","doi":"10.1371/journal.pone.0029787","title":"Effect of the Salmonella Pathogenicity Island 2 Type III Secretion System on Salmonella Survival in Activated Chicken Macrophage-Like HD11 Cells","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Izaak Walton Killam Health Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation","keywords":"Salmonella enterica; Microbiology; Salmonella enteritidis; Biology; Salmonella; Serotype; Type three secretion system; Escherichia coli; Secretion; Enterobacteriaceae; Macrophage; Mutant; Bacteria; In vitro; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002670509,0.0003791796,0.0003728258,0.0001127607,0.000109965,0.0002580396,0.0001941761,0.0002969347,0.0008888033],"category_scores_gemma":[0.0001634275,0.0001332848,0.0002965466,0.00010956,0.0001506429,0.0001301832,0.0002111422,0.0004823647,0.0004461459],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001778179,"about_ca_system_score_gemma":0.0001858791,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001250127,"about_ca_topic_score_gemma":0.001419851,"domain_scores_codex":[0.9996907,0.00009747926,0.00005046866,0.00004428457,0.00005446903,0.00006271224],"domain_scores_gemma":[0.9997413,0.00007768132,0.00004059818,0.00004516477,0.00005088522,0.00004431242],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004430576,0.0000751925,0.0003015886,0.00004860041,0.000005862041,0.00005914199,0.000047075,0.00005137458,0.9983835,0.00002740644,0.00003585583,0.0005212962],"study_design_scores_gemma":[0.00004185794,0.002238274,0.007567779,0.00001113885,0.00001958358,0.0001437825,0.0001130886,0.001131952,0.9873767,0.00001745471,0.001328254,0.00001013534],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980812,0.0003076916,0.0006167531,0.00005728535,0.00002386834,0.00002716342,0.0003501095,0.00002065749,0.0005153018],"genre_scores_gemma":[0.9945931,0.0002788931,0.001838748,0.0000756938,0.000008790885,0.00005974473,0.0008429007,0.000013991,0.002288118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001250127,"threshold_uncertainty_score":0.002973318,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03621993698212583,"score_gpt":0.2059204933850708,"score_spread":0.1697005564029449,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}